» Sources and properties of all sequences for aspartokinase cohesion groups

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Info: Cohesion 'Group' 99 is comprised of orphan sequences.

Cohesion Group Gene Nbd Subhomology Group Domain Phylum Class Order Family Genus Genome Name Acronym IMG Taxon ID NCBI Taxon ID IMG ID SEED ID Strain-level Gene Neighborhood Lateral Gene Transfer? Locus Tag Fused Domains Ask CDD ACT CDD KFGG Motif KYGG Motif KIGG Motif PDB ID # of Ask's Hdh present? Threonine Deaminase Present? Citramalate Synthase Present? Hdh-thr Hdh-met Hdh-min Internal Start Trp number Protein length %Trp %Proteomic Trp p:P Trp ratio
1 α Eukaryota Fungi Ascomycota Pezizomycotina Eurotiomycetes Aspergillus Aspergillus fumigatus Af293 Afum_Aa 638208601 330879 638265513 - - No Afu5g05590   cd04247 cd04934/cd04919 1 0 0   1 Yes Yes No     638263406 absent 3 518 0.57 1.45 0.39
1 α Eukaryota Fungi Ascomycota Saccharomycetales Saccharomycetaceae Pichia Pichia stipitis CBS 6054 Psti_Aa 640281010 322104 640392646 - - No PICST_69242   cd04247 cd04934/cd04919 1 0 0   1 Yes Yes No     640389232 absent 2 536 0.37 1.02 0.36
1 α Eukaryota Fungi Ascomycota Saccharomycotina Saccharomycetes Saccharomyces Saccharomyces cerevisiae S288c Scer_Aa 638208609 559292 638210220 fig|4932.3.peg.2035   - No YER052C   cd04247 cd04934/cd04919 1 0 0   1 Yes Yes No     638211958 absent 2 527 0.37 1.03 0.36
1 α Eukaryota Fungi Basidiomycota Hymenomycetes Tremellaceae Cryptococcus Cryptococcus neoformans var. neoformans JEC21 Fneo_Aa 638208604 214684 638258689 - - No CNI02030   cd04247 cd04934/cd04919 0 1 0   1 Yes Yes No     638253362 absent 2 654 0.3 1.37 0.22
2 α Bacteria Proteobacteria Alphaproteobacteria Rhodobacterales Hyphomonadaceae Hyphomonas Hyphomonas neptunium ATCC 15444 Hnep_Aa 637000135 228405 638144206 fig|228405.5.peg.1588   - No HNE_1643   cd04248 cd04910/cd04915 0 0 1   2 Yes No No 638144870     absent 3 482 0.62 1.37 0.45
2 α Bacteria Proteobacteria Alphaproteobacteria Rhodobacterales Rhodobacteraceae Silicibacter Silicibacter sp. TM1040 SILI-1b 637000268 292414 638005851 fig|292414.1.peg.2281   - No TM1040_0554   cd04248 cd04910/cd04915 0 0 1   2 Yes Yes No 638007484     absent 2 478 0.41 1.36 0.3
2 α Bacteria Proteobacteria Alphaproteobacteria Rhodospirillales Acetobacteraceae Acidiphilium Acidiphilium cryptum JF-5 Acry_Ab 640427101 349163 640554942 fig|349163.4.peg.3469   - No Acry_3012   cd04248 cd04910/cd04915 0 0 1   2 Yes No No 640553214     absent 2 488 0.4 1.3 0.31
2 α Bacteria Proteobacteria Alphaproteobacteria Sphingomonadales Sphingomonadaceae Sphingopyxis Sphingopyxis alaskensis RB2256 Sala_Ab 637000271 317655 638011338 fig|317655.9.peg.2810   - No Sala_2953   cd04248 cd04910/cd04915 0 0 1   2 Yes No No 638009171     absent 3 480 0.62 1.46 0.42
2 α Bacteria Proteobacteria Deltaproteobacteria Desulfobacterales Desulfobulbaceae Desulfococcus Desulfococcus oleovorans Hxd3 Dole_Ab 641228490 96561 641263556 fig|96561.3.peg.959   - No Dole_0959   cd04248 cd04910/cd04915 0 0 1   2 Yes No No 641262872     absent 6 470 1.27 1.15 1.1
2 α Bacteria Proteobacteria Deltaproteobacteria Desulfobacterales Desulfobulbaceae Desulfotalea Desulfotalea psychrophila LSv54 Dpsy_Aa 637000094 177439 637527702 fig|177439.1.peg.451   - No DP0451   cd04248 cd04910/cd04915 0 0 1   1 Yes Yes No 637529033     absent 1 468 0.21 1.02 0.21
2 α Bacteria Proteobacteria Deltaproteobacteria Myxococcales Myxococcacea Anaeromyxobacter Anaeromyxobacter dehalogenans 2CP-C Adeh_Ab 637000007 290397 637863352 fig|290397.13.peg.1809   - No Adeh_1815   cd04248 cd04910/cd04915 0 0 1   2 Yes No No 637863174 637862929 637865489 absent 2 494 0.4 1.28 0.31
2 α Bacteria Proteobacteria Gammaproteobacteria-upper Alteromonadales Alteromonadaceae Marinobacter Marinobacter aquaeolei VT8 Mhyd_Ab 639633037 351348 639810106 fig|351348.5.peg.499   - No Maqu_0149   cd04248 cd04910/cd04915 0 0 1   2 Yes Yes No 639812248     absent 3 485 0.61 1.42 0.43
2 α Bacteria Proteobacteria Gammaproteobacteria-upper Alteromonadales Alteromonadaceae Saccharophagus Saccharophagus degradans 2-40 Sdeg_Ab 637000249 203122 637920266 fig|203122.12.peg.1190   - No Sde_1192   cd04248 cd04910/cd04915 0 0 1   2 Yes Yes No 637920283     absent 2 477 0.41 1.35 0.3
2 α Bacteria Proteobacteria Gammaproteobacteria-upper Chromatiales Chromatiaceae Nitrosococcus Nitrosococcus oceani ATCC 19707 Noce_Ab 637000194 323261 637737534 fig|323261.3.peg.76   - No Noc_1029   cd04248 cd04910/cd04915 0 0 1   2 Yes Yes No 637738933     absent 3 480 0.62 1.48 0.42
2 α Bacteria Proteobacteria Gammaproteobacteria-upper Oceanospirillales Oceanospirillaceae Marinomonas Marinomonas sp. MWYL1 MARI_Ab 640753033 400668 640803501 fig|400668.6.peg.1181   - No Mmwyl1_1162   cd04248 cd04910/cd04915 0 0 1   2 Yes Yes No 640806148     absent 3 481 0.62 1.25 0.5
2 α Bacteria Proteobacteria Gammaproteobacteria-upper Pseudomonadales Pseudomonadaceae Pseudomonas Pseudomonas stutzeri A1501 Pstu_Ab 640427133 379731 640486133 - - No PST_0177   cd04248 cd04910/cd04915 0 0 1   2 Yes Yes No 640487154     absent 2 476 0.42 1.43 0.29
2 α Bacteria Proteobacteria Gammaproteobacteria-upper Thiotrichales Piscirickettsiaceae Thiomicrospira Thiomicrospira crunogena XCL-2 Tcru_Ab 637000325 317025 637785232 fig|317025.3.peg.468   - No Tcr_0521   cd04248 cd04910/cd04915 0 0 1   2 Yes Yes No 637785983     absent 3 481 0.62 1.24 0.5
2 α Bacteria Proteobacteria Gammaproteobacteria-lower Vibrionales Vibrionaceae Photobacterium Photobacterium profundum SS9 Ppro_Ba 637000206 298386 637589809/637589811 fig|298386.1.peg.1604   fig|314280.3.peg.2032, Photobacterium profundum 3TCK
 No PBPRB1487/1489   cd04248 cd04910/cd04915 0 0 1   5 Yes Yes No       absent 2 332 0.6 1.28 0.47
2 α Bacteria Proteobacteria Gammaproteobacteria-lower Vibrionales Vibrionaceae Vibrio Vibrio cholerae O1 biovar eltor str. N16961 Vcho_Fa 637000333 243277 637050092 fig|243277.1.peg.3549   fig|345073.6.peg.359, Vibrio cholerae O395
fig|404974.3.peg.11, Vibrio cholerae AM-19226
fig|412966.3.peg.2266, Vibrio cholerae 1587
fig|88888881.3.peg.1365, Vibrio cholerae NRT36s
 No VCA0822   cd04248 cd04910/cd04915 0 0 1   5 Yes Yes No       absent 3 474 0.63 1.32 0.48
2 α Bacteria Proteobacteria Gammaproteobacteria-lower Vibrionales Vibrionaceae Vibrio Vibrio fischeri ES114 Vfis_Ac 637000334 312309 637638477 fig|312309.3.peg.3741   fig|388396.7.peg.3767, Vibrio fischeri MJ11
 No VFA1125   cd04248 cd04910/cd04915 0 0 1   5 Yes Yes No       absent 2 475 0.42 1.18 0.36
2 α Bacteria Proteobacteria Gammaproteobacteria-lower Vibrionales Vibrionaceae Vibrio Vibrio parahaemolyticus RIMD 2210633 Vpar_Ac 637000335 223926 637398698 fig|223926.1.peg.1719   fig|419109.12.peg.391, Vibrio parahaemolyticus AQ3810
 No VP1719   cd04248 cd04910/cd04915 0 0 1   5 Yes Yes No       absent 2 474 0.42 1.23 0.34
3 α Bacteria Firmicutes Bacilli Bacillales Bacillaceae Bacillus Bacillus clausii KSM-K16 Bcla_Ab 637000019 66692 637620119 fig|66692.3.peg.1711   - No ABC1763   cd04245 cd04911/cd04916 1 0 0   2 Yes Yes No 637621311 637619929 637618323 absent 0 452 0 1.09 0
3 α Bacteria Firmicutes Bacilli Bacillales Bacillaceae Bacillus Bacillus halodurans C-125 Bhal-1_Ac 637000020 272558 637058202 fig|272558.1.peg.1500   - No BH1500   cd04245 cd04911/cd04916 1 0 0   3 Yes Yes No 637060139 637057951 637058439 absent 0 456 0 1.13 0
3 α Bacteria Firmicutes Bacilli Bacillales Bacillaceae Bacillus Bacillus licheniformis ATCC 14580 (Goettingen) Blic_Ac 639279303 279010 639309654 fig|279010.5.peg.2450   - No BLi00462   cd04245 cd04911/cd04916 1 0 0   3 Yes Yes No 639312540     absent 0 453 0 1.02 0
3 α Bacteria Firmicutes Bacilli Bacillales Bacillaceae Bacillus Bacillus subtilis 168 Bsub_Ac 637000022 224308 637030502 fig|224308.1.peg.380   - No BSU03790   cd04245 cd04911/cd04916 1 0 0   3 Yes Yes No 637033411     absent 0 454 0 1.03 0
3 α Bacteria Firmicutes Bacilli Bacillales Bacillaceae Geobacillus Geobacillus kaustophilus HTA426 Gkau_Ab 637000118 235909 637600008 fig|235909.3.peg.3237   - No GK3195   cd04245 cd04911/cd04916 1 0 0   2 Yes Yes No 637599776     absent 1 458 0.21 1.29 0.16
3 α Bacteria Firmicutes Bacilli Bacillales Bacillaceae Oceanobacillus Oceanobacillus iheyensis HTE831 Oihe_Ab 637000201 221109 637325517 fig|221109.1.peg.1871   - No OB1871   cd04245 cd04911/cd04916 1 0 0   2 Yes No No 637324081     absent 0 464 0 1.01 0
3 α Bacteria Firmicutes Bacilli Bacillales Listeriaceae Listeria Listeria innocua Clip11262 Linn_Ac 637000152 272626 637225247 fig|272626.1.peg.2456   - No lin2473   cd04245 cd04911/cd04916 1 0 0   3 Yes Yes No 637225465     absent 0 453 0 0.94 0
3 α Bacteria Firmicutes Bacilli Bacillales Listeriaceae Listeria Listeria monocytogenes 4b F2365 Lmon_Ac 637000154 265669 637166144 fig|265669.1.peg.2321   fig|169963.1.peg.2364, Listeria monocytogenes EGD-e
fig|267409.1.peg.1167, Listeria monocytogenes str. 1/2a F6854
fig|393117.3.peg.2606, Listeria monocytogenes FSL J1-194
fig|393121.3.peg.2605, Listeria monocytogenes FSL J2-071
fig|393123.3.peg.2334, Listeria monocytogenes FSL N1-017
fig|393124.3.peg.1966, Listeria monocytogenes FSL N3-165
fig|393128.3.peg.2377, Listeria monocytogenes F6900
fig|393130.3.peg.1478, Listeria monocytogenes J0161
fig|393131.3.peg.2281, Listeria monocytogenes J2818
fig|393133.3.peg.901, Listeria monocytogenes 10403S
fig|401650.3.peg.2414, Listeria monocytogenes Aureli 1997
 No LMOf2365_2345   cd04245 cd04911/cd04916 1 0 0   3 Yes Yes No 637166319     absent 0 453 0 0.92 0
3 α Bacteria Firmicutes Bacilli Bacillales Listeriaceae Listeria Listeria welshimeri sv 6b SLCC5334 Lwel_Ac 639633035 386043 639707265 fig|386043.6.peg.2260   - No lwe2323   cd04245 cd04911/cd04916 1 0 0   3 Yes Yes No 639707439     absent 0 453 0 0.92 0
3 α Bacteria Firmicutes Bacilli Bacillales Staphylococcaceae Staphylococcus Staphylococcus aureus aureus COL Saur_Ab 637000273 93062 637152113 fig|93062.4.peg.1448   fig|158878.1.peg.1327, Staphylococcus aureus subsp. aureus Mu50
fig|158879.1.peg.1203, Staphylococcus aureus subsp. aureus N315
fig|196620.1.peg.1214, Staphylococcus aureus subsp. aureus MW2
fig|282458.1.peg.1261, Staphylococcus aureus subsp. aureus MRSA252
fig|282458.1.peg.2690, Staphylococcus aureus subsp. aureus MRSA252
fig|282459.1.peg.1259, Staphylococcus aureus subsp. aureus MSSA476
fig|282459.1.peg.2608, Staphylococcus aureus subsp. aureus MSSA476
fig|359786.3.peg.1241, Staphylococcus aureus subsp. aureus JH9
fig|367830.3.peg.986, Staphylococcus aureus subsp. aureus USA300
fig|418127.4.peg.1220, Staphylococcus aureus subsp. aureus Mu3
fig|426430.6.peg.1203, Staphylococcus aureus subsp. aureus str. Newman
fig|93061.3.peg.1280, Staphylococcus aureus subsp. aureus NCTC 8325
fig|273036.3.peg.1536, Staphylococcus aureus RF122
 No SACOL1360   cd04245 cd04911/cd04916 1 0 0   2 Yes Yes No   637152115   absent 0 460 0 0.74 0
3 α Bacteria Firmicutes Bacilli Bacillales Staphylococcaceae Staphylococcus Staphylococcus epidermidis RP62A Sepi_Ab 637000282 176279 637167552 fig|176279.3.peg.976   fig|176280.1.peg.1008, Staphylococcus epidermidis ATCC 12228
 No SERP0896   cd04245 cd04911/cd04916 1 0 0   2 Yes Yes No   637167553   absent 0 458 0 0.72 0
3 α Bacteria Firmicutes Bacilli Bacillales Staphylococcaceae Staphylococcus Staphylococcus haemolyticus JCSC1435 Shae_Ab 637000283 279808 637667565 fig|279808.3.peg.2484   - No SH1580   cd04245 cd04911/cd04916 1 0 0   2 Yes Yes No   637667564   absent 0 460 0 0.77 0
3 α Bacteria Firmicutes Bacilli Bacillales Staphylococcaceae Staphylococcus Staphylococcus saprophyticus saprophyticus ATCC 15305 Ssap_Ab 637000284 342451 637696830 fig|342451.4.peg.856   - No SSP1439   cd04245 cd04911/cd04916 1 0 0   2 Yes Yes No   637696829   absent 0 455 0 0.77 0
3 α Bacteria Firmicutes Bacilli Lactobacillales Enterococcaceae Enterococcus Enterococcus faecalis V583 Efae_Aa 637000101 226185 637413642 fig|226185.1.peg.345   - No EF0368   cd04245 cd04911/cd04916 1 0 0   1 Yes No No 637415584     absent 0 450 0 0.94 0
3 α Bacteria Firmicutes Bacilli Lactobacillales Lactobacillaceae Lactobacillus Lactobacillus acidophilus NCFM Laci_Aa 637000138 272621 637626454 fig|272621.3.peg.1142   - No LBA1215   cd04245 cd04911/cd04916 1 0 0   2 Yes No No   637626452   absent 1 453 0.22 1.03 0.21
3 α Bacteria Firmicutes Bacilli Lactobacillales Lactobacillaceae Lactobacillus Lactobacillus acidophilus NCFM Laci_Ab 637000138 272621 637626114 fig|272621.3.peg.171   - No LBA0850   cd04245 cd04911/cd04916 1 0 0   2 Yes No No   637626452   absent 1 451 0.22 1.03 0.21
3 α Bacteria Firmicutes Bacilli Lactobacillales Lactobacillaceae Lactobacillus Lactobacillus casei ATCC 334 Lcas_Ab 639633028 321967 639663080 fig|321967.8.peg.110   - No LSEI_0099   cd04245 cd04911/cd04916 1 0 0   2 Yes No No   639665076   absent 1 459 0.21 1.1 0.19
3 α Bacteria Firmicutes Bacilli Lactobacillales Lactobacillaceae Lactobacillus Lactobacillus casei ATCC 334 Lcas_Aa 639633028 321967 639665077 fig|321967.8.peg.2098   - No LSEI_2152   cd04245 cd04911/cd04916 1 0 0   2 Yes No No   639665076   absent 2 448 0.44 1.1 0.4
3 α Bacteria Firmicutes Bacilli Lactobacillales Lactobacillaceae Lactobacillus Lactobacillus delbrueckii bulgaricus ATCC 11842 Ldel_Ba 637000139 390333 638012589 - fig|321956.5.peg.1088, Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365
 No Ldb1349   cd04245 cd04911/cd04916 1 0 0   1 Yes No No   638012590   absent 1 446 0.22 0.99 0.22
3 α Bacteria Firmicutes Bacilli Lactobacillales Lactobacillaceae Lactobacillus Lactobacillus gasseri ATCC 33323 Lgas_Aa 639633030 324831 639672919 fig|324831.10.peg.1014   fig|1596.1.peg.176, Lactobacillus gasseri
 No LGAS_1078   cd04245 cd04911/cd04916 1 0 0   1 Yes No No   639672916   absent 1 451 0.22 1.03 0.21
3 α Bacteria Firmicutes Bacilli Lactobacillales Lactobacillaceae Lactobacillus Lactobacillus plantarum WCFS1 Lpla_Ab 637000141 220668 637389415 fig|220668.1.peg.1919   - No lp_2308   cd04245 cd04911/cd04916 1 0 0   2 Yes No No 637387915 637389605   absent 1 450 0.22 1.17 0.19
3 α Bacteria Firmicutes Bacilli Lactobacillales Lactobacillaceae Lactobacillus Lactobacillus reuteri F275 Lreu_Aa 640427118 299033 640590446 fig|299033.6.peg.602   - No Lreu_0611   cd04245 cd04911/cd04916 1 0 0   1 No No No       absent 1 452 0.22 1.08 0.2
3 α Bacteria Firmicutes Bacilli Lactobacillales Lactobacillaceae Pediococcus Pediococcus pentosaceus ATCC 25745 Ppen_Aa 639633049 278197 639661294 fig|278197.10.peg.121   - No PEPE_0137   cd04245 cd04911/cd04916 1 0 0   1 No No No       absent 1 459 0.21 0.97 0.22
3 α Bacteria Firmicutes Bacilli Lactobacillales Leuconostocaceae Leuconostoc Leuconostoc mesenteroides mesenteroides ATCC 8293 Lmes_Ba 639633034 203120 639674492 fig|203120.4.peg.767   - No LEUM_0784   cd04245 cd04911/cd04916 1 0 0   1 Yes Yes No 639674494     absent 1 451 0.22 1.06 0.21
3 α Bacteria Firmicutes Bacilli Lactobacillales Leuconostocaceae Oenococcus Oenococcus oeni PSU-1 Ooen_Aa 639633047 203123 639669713 fig|203123.1.peg.1867   - No OEOE_1544   cd04245 cd04911/cd04916 1 0 0   1 Yes No No 639669715     absent 1 479 0.2 1 0.2
3 α Bacteria Firmicutes Bacilli Lactobacillales Streptococcaceae Lactococcus Lactococcus lactis cremoris MG1363 Llac_Ca 640069315 416870 640102214 fig|416870.7.peg.1819   fig|272622.8.peg.923, Lactococcus lactis subsp. cremoris SK11
fig|272623.1.peg.759, Lactococcus lactis subsp. lactis Il1403
 No llmg_1820   cd04245 cd04911/cd04916 1 0 0   1 Yes Yes No 640101757     absent 1 450 0.22 0.99 0.22
3 α Bacteria Firmicutes Bacilli Lactobacillales Streptococcaceae Streptococcus Streptococcus agalactiae 2603V/R Saga_Ba 637000285 208435 637315536 fig|208435.1.peg.337   fig|205921.3.peg.315, Streptococcus agalactiae A909
fig|342613.3.peg.705, Streptococcus agalactiae 18RS21
fig|211110.1.peg.326, Streptococcus agalactiae NEM316
 No SAG0339   cd04245 cd04911/cd04916 1 0 0   1 Yes No No   637316302   absent 1 450 0.22 0.85 0.26
3 α Bacteria Firmicutes Bacilli Lactobacillales Streptococcaceae Streptococcus Streptococcus mutans UA159 Smut_Aa 637000288 210007 637348244 fig|210007.1.peg.1588   - No SMU.1748   cd04245 cd04911/cd04916 1 0 0   1 Yes Yes No   637347527   absent 2 452 0.44 0.87 0.51
3 α Bacteria Firmicutes Bacilli Lactobacillales Streptococcaceae Streptococcus Streptococcus pneumoniae R6 Spne_Aa 637000289 171101 637191494 fig|171101.1.peg.374   fig|373153.25.peg.407, Streptococcus pneumonia pneumoniae D39
fig|406557.4.peg.393, Streptococcus pneumoniae SP6-BS73
fig|406558.4.peg.1412, Streptococcus pneumoniae SP9-BS68
fig|453363.3.peg.41, Streptococcus pneumonia SP195
fig|453364.7.peg.187, Streptococcus pneumoniae CDC0288-04
fig|453364.8.peg.192, Streptococcus pneumoniae CDC0288-04
fig|516950.3.peg.431, Streptococcus pneumoniae CGSP14
fig|1313.5.peg.1593, Streptococcus pneumoniae OXC141
fig|170187.1.peg.383, Streptococcus pneumoniae TIGR4
fig|216600.3.peg.326, Streptococcus pneumoniae 23F
fig|406556.4.peg.279, Streptococcus pneumoniae SP3-BS71
fig|406559.4.peg.369, Streptococcus pneumoniae SP11-BS70
fig|406560.4.peg.1710, Streptococcus pneumoniae SP14-BS69
fig|406561.4.peg.2139, Streptococcus pneumoniae SP18-BS74
fig|406562.4.peg.2078, Streptococcus pneumoniae SP19-BS75
fig|406563.4.peg.1829, Streptococcus pneumoniae SP23-BS72
fig|453361.3.peg.53, Streptococcus pneumoniae CDC1087-00
fig|453362.3.peg.69, Streptococcus pneumoniae CDC1873-00
fig|487214.3.peg.512, Streptococcus pneumoniae Hungary19A-6
 No spr0374   cd04245 cd04911/cd04916 1 0 0   1 Yes Yes No 637192344     absent 2 454 0.44 0.92 0.48
3 α Bacteria Firmicutes Bacilli Lactobacillales Streptococcaceae Streptococcus Streptococcus sanguinis SK36 Ssan_Aa 640069334 388919 640104975 fig|388919.8.peg.1726   - No SSA_1943   cd04245 cd04911/cd04916 1 0 0   1 Yes Yes No 640104096     absent 2 460 0.43 0.92 0.47
3 α Bacteria Firmicutes Bacilli Lactobacillales Streptococcaceae Streptococcus Streptococcus suis 05ZYH33 Ssui_Aa 640427146 391295 640515160 - fig|1307.2.peg.1263, Streptococcus suis
 No SSU05_1811   cd04245 cd04911/cd04916 1 0 0   1 Yes Yes No 640514148     absent 2 453 0.44 0.91 0.48
3 α Bacteria Firmicutes Bacilli Lactobacillales Streptococcaceae Streptococcus Streptococcus thermophilus CNRZ1066 Sthe_Aa 637000302 299768 637592794 fig|299768.3.peg.1445   fig|322159.7.peg.374, Streptococcus thermophilus LMD-9
fig|264199.3.peg.1235, Streptococcus thermophilus LMG 18311
 No str0378   cd04245 cd04911/cd04916 1 0 0   1 Yes Yes No 637592882     absent 2 452 0.44 0.84 0.52
3 α Bacteria Firmicutes Clostridia Clostridiales Clostridiaceae Clostridium Clostridium acetobutylicum ATCC 824 Cace_Ab 637000076 272562 637175937 fig|272562.1.peg.448   - No CAC0278   cd04245 cd04911/cd04916 1 0 0   2 Yes No No 637176669     absent 1 437 0.22 0.74 0.3
3 α Bacteria Firmicutes Clostridia Clostridiales Clostridiaceae Clostridium Clostridium botulinum A ATCC 3502 Cbot_Bc 640427109 413999 640573237 fig|413999.4.peg.1559   fig|441770.4.peg.1542, Clostridium botulinum A str. ATCC 19397
fig|441771.4.peg.1541, Clostridium botulinum A str. Hall
 No CBO1640   cd04245 cd04911/cd04916 1 0 0   3 Yes No No 640573238 640573473   absent 1 439 0.22 0.68 0.32
3 α Bacteria Firmicutes Clostridia Clostridiales Clostridiaceae Clostridium Clostridium novyi NT Cnov_Ab 639633021 386415 639732718 - - No NT01CX_0187   cd04245 cd04911/cd04916 1 0 0   2 Yes No No 639730992     absent 1 438 0.22 0.6 0.37
3 α Bacteria Firmicutes Clostridia Clostridiales Clostridiaceae Clostridium Clostridium tetani E88 Ctet_Ab 637000080 212717 637387085 fig|212717.1.peg.2115   - No CTC02356   cd04245 cd04911/cd04916 1 0 0   2 Yes No No 637387084   637385729 absent 1 439 0.22 0.64 0.34
3 α Bacteria Firmicutes Clostridia Clostridiales Clostridiaceae Clostridium Clostridium thermocellum ATCC 27405 Cthe_Aa 640069309 203119 640106799 - - No Cthe_1375   cd04245 cd04911/cd04916 1 0 0   1 Yes No No 640105702 640106800   absent 0 449 0 0.88 0
4 α Bacteria Proteobacteria Gammaproteobacteria-lower Aeromonadales Aeromonadaceae Aeromonas Aeromonas hydrophila hydrophila ATCC 7966 Ahyd_Ac 639633004 380703 639715593 fig|380703.5.peg.2884   - Yes AHA_3018 Ask/Hdh cd04257 cd04921/cd04922 1 0 0   4 Yes Yes No       absent 1 471 0.21 1.47 0.14
4 α Bacteria Proteobacteria Gammaproteobacteria-lower Aeromonadales Aeromonadaceae Aeromonas Aeromonas salmonicida salmonicida A449 Asal_Ad 641522605 382245 640465941 fig|382245.6.peg.2842   - Yes ASA_3040 Ask/Hdh cd04257 cd04921/cd04922 1 0 0   4 Yes Yes No       absent 1 482 0.2 1.51 0.13
4 α Bacteria Proteobacteria Gammaproteobacteria-lower Alteromonadales Colwelliaceae Colwellia Colwellia psychrerythraea 34H Cpsy_Ab 637000081 167879 637286732 fig|167879.3.peg.4481   - Yes CPS_4291 Ask/Hdh cd04257 cd04921/cd04922 1 0 0   3 Yes Yes No       absent 1 475 0.21 1.12 0.19
4 α Bacteria Proteobacteria Gammaproteobacteria-lower Alteromonadales Pseudoalteromonadaceae Pseudoalteromona Pseudoalteromonas atlantica T6c Patl_Ab 637000216 342610 638056610 fig|342610.3.peg.1699   - Yes Patl_3580 Ask/Hdh cd04257 cd04921/cd04922 1 0 0   2 Yes Yes No       absent 2 471 0.42 1.24 0.34
4 α Bacteria Proteobacteria Gammaproteobacteria-lower Alteromonadales Pseudoalteromonadaceae Pseudoalteromona Pseudoalteromonas haloplanktis TAC125 Phal_Ad 637000217 326442 637735307 fig|326442.4.peg.2446   - Yes PSHAa2379 Ask/Hdh cd04257 cd04921/cd04922 1 0 0   4 Yes Yes No       absent 3 461 0.65 1.1 0.59
4 α Bacteria Proteobacteria Gammaproteobacteria-lower Alteromonadales Psychromonadaceae Psychromonas Psychromonas ingrahamii 37 Ping_Ab 639633052 357804 639796485 fig|357804.5.peg.1231   - Yes Ping_1275 Ask/Hdh cd04257 cd04921/cd04922 1 0 0   2 Yes Yes No       absent 1 472 0.21 1.14 0.18
4 α Bacteria Proteobacteria Gammaproteobacteria-lower Alteromonadales Shewanellaceae Shewanella Shewanella amazonensis SB2B Sama_Ad 639633057 326297 639780240 fig|326297.7.peg.852   - Yes Sama_0905 Ask/Hdh cd04257 cd04921/cd04922 1 0 0   4 Yes Yes No       absent 5 471 1.06 1.27 0.83
4 α Bacteria Proteobacteria Gammaproteobacteria-lower Alteromonadales Shewanellaceae Shewanella Shewanella baltica OS155 Sbal_Ad 640069330 325240 640118446 fig|325240.9.peg.1471   fig|399599.3.peg.1330, Shewanella baltica OS195
fig|402882.10.peg.1391, Shewanella baltica OS185
 Yes Sbal_1227 Ask/Hdh cd04257 cd04921/cd04922 1 0 0   4 Yes Yes No       absent 6 472 1.27 1.25 1.02
4 α Bacteria Proteobacteria Gammaproteobacteria-lower Alteromonadales Shewanellaceae Shewanella Shewanella denitrificans OS217 Sden_Ab 637000256 318161 637956786 fig|318161.14.peg.2663   - Yes Sden_2740 Ask/Hdh cd04257 cd04921/cd04922 1 0 0   3 Yes Yes No       absent 5 471 1.06 1.19 0.89
4 α Bacteria Proteobacteria Gammaproteobacteria-lower Alteromonadales Shewanellaceae Shewanella Shewanella frigidimarina NCIMB 400 Sfri_Ac 637000257 318167 638135726 fig|318167.10.peg.2789   - Yes Sfri_2906 Ask/Hdh cd04257 cd04921/cd04922 1 0 0   3 Yes Yes No       absent 5 471 1.06 1.18 0.9
4 α Bacteria Proteobacteria Gammaproteobacteria-lower Alteromonadales Shewanellaceae Shewanella Shewanella loihica PV-4 Sloi_Ac 640069331 323850 640162612 fig|323850.3.peg.86   - Yes Shew_1079 Ask/Hdh cd04257 cd04921/cd04922 1 0 0   3 Yes Yes No       absent 4 472 0.84 1.21 0.69
4 α Bacteria Proteobacteria Gammaproteobacteria-lower Alteromonadales Shewanellaceae Shewanella Shewanella oneidensis MR-1 Sone_Ad 637000258 211586 637345216 fig|211586.1.peg.3113   - Yes SO3415 Ask/Hdh cd04257 cd04921/cd04922 1 0 0   4 Yes Yes No       absent 4 472 0.84 1.28 0.66
4 α Bacteria Proteobacteria Gammaproteobacteria-lower Alteromonadales Shewanellaceae Shewanella Shewanella putrefaciens CN-32 Sput_Ad 640427141 319224 640499921 fig|319224.13.peg.2518   fig|351745.7.peg.1192, Shewanella sp. W3-18-1
 Yes Sputcn32_2735 Ask/Hdh cd04257 cd04921/cd04922 1 0 0   4 Yes Yes No       absent 5 472 1.05 1.23 0.85
4 α Bacteria Proteobacteria Gammaproteobacteria-lower Alteromonadales Shewanellaceae Shewanella Shewanella sp. ANA-3 SHEW-3d 639633058 94122 639725690 fig|94122.5.peg.1258   fig|60480.16.peg.1085, Shewanella sp. MR-4
fig|60481.10.peg.1151, Shewanella sp. MR-7
fig|323850.3.peg.86, Shewanella sp. PV-4
fig|351745.7.peg.1192, Shewanella sp. W3-18-1
 Yes Shewana3_1139 Ask/Hdh cd04257 cd04921/cd04922 1 0 0   4 Yes Yes No       absent 4 472 0.84 1.25 0.67
4 α Bacteria Proteobacteria Gammaproteobacteria-lower Enterobacteriales Enterobacteriaceae Blochmannia Candidatus Blochmannia floridanus Bflo_a 637000056 203907 637443585 fig|203907.1.peg.104   - Yes Bfl111 Ask/Hdh cd04257 cd04921/cd04922 1 0 0   1 Yes Yes No       absent 2 473 0.42 1.03 0.41
4 α Bacteria Proteobacteria Gammaproteobacteria-lower Enterobacteriales Enterobacteriaceae Buchnera Buchnera aphidicola APS Baph_Aa 637000043 107806 637056212 fig|107806.1.peg.193   fig|198804.1.peg.182, Buchnera aphidicola str. Sg (Schizaphis graminum)
fig|224915.1.peg.171, Buchnera aphidicola str. Bp (Baizongia pistaciae)
 Yes BU194 Ask/Hdh cd04257 cd04921/cd04892 1 0 0   1 Yes No No       absent 1 472 0.21 0.9 0.23
4 α Bacteria Proteobacteria Gammaproteobacteria-lower Enterobacteriales Enterobacteriaceae Enterobacter Enterobacter sp. 638 ENTE-2c 640427113 399742 640490735 fig|399742.4.peg.618   - Yes Ent638_0564 Ask/Hdh cd04257 cd04921/cd04922 1 0 0   3 Yes Yes No       absent 1 471 0.21 1.52 0.14
4 α Bacteria Proteobacteria Gammaproteobacteria-lower Enterobacteriales Enterobacteriaceae Erwinia Erwinia carotovora atroseptica SCRI1043 Patr_Ac 637000102 218491 637380378 fig|218491.3.peg.2535   - Yes ECA3891 Ask/Hdh cd04257 cd04921/cd04922 1 0 0   3 Yes Yes No       absent 1 471 0.21 1.38 0.15
4 α Bacteria Proteobacteria Gammaproteobacteria-lower Enterobacteriales Enterobacteriaceae Escherichia Escherichia coli K12 Ecol_Ac 637000106 83333 637013380 fig|83333.1.peg.2   fig|216593.1.peg.3579, Escherichia coli E2348/69
fig|340197.3.peg.3254, Escherichia coli F11
fig|216592.1.peg.4424, Escherichia coli 042
fig|340184.3.peg.2497, Escherichia coli B7A
fig|340185.3.peg.4022, Escherichia coli E22
fig|344601.3.peg.3512, Escherichia coli B171
fig|344610.3.peg.751, Escherichia coli 53638
fig|481805.3.peg.3926, Escherichia coli ATCC 8739
 Yes b0002 Ask/Hdh cd04257 cd04921/cd04922 1 0 0   3 Yes Yes No       absent 1 471 0.21 1.53 0.14
4 α Bacteria Proteobacteria Gammaproteobacteria-lower Enterobacteriales Enterobacteriaceae Photorhabdus Photorhabdus luminescens laumondii TTO1 Plum_Ac 637000207 243265 637462394 fig|243265.1.peg.537   - Yes plu0563 Ask/Hdh cd04257 cd04921/cd04922 1 0 0   3 Yes Yes No       absent 1 471 0.21 1.35 0.16
4 α Bacteria Proteobacteria Gammaproteobacteria-lower Enterobacteriales Enterobacteriaceae Salmonella Salmonella enterica enterica sv Typhi Ty2 Sent_Nc 637000253 209261 637403850 fig|209261.1.peg.2   fig|220341.1.peg.2, Salmonella enterica subsp. enterica serovar Typhi str. CT18
fig|594.1.peg.4953, Salmonella enterica subsp. enterica serovar Gallinarum
fig|295319.3.peg.223, Salmonella enterica subsp. enterica serovar Paratypi A str. ATCC 9150
fig|321314.4.peg.142, Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67
 Yes t0002 Ask/Hdh cd04257 cd04921/cd04922 1 0 0   3 Yes Yes No       absent 1 471 0.21 1.53 0.14
4 α Bacteria Proteobacteria Gammaproteobacteria-lower Enterobacteriales Enterobacteriaceae Salmonella Salmonella typhimurium LT2 Styp_Ac 637000255 99287 637210757 fig|99287.1.peg.2   - Yes STM0002 Ask/Hdh cd04257 cd04921/cd04922 1 0 0   3 Yes Yes No       absent 1 471 0.21 1.52 0.14
4 α Bacteria Proteobacteria Gammaproteobacteria-lower Enterobacteriales Enterobacteriaceae Shigella Shigella boydii Sb227 Sboy_Ab 637000261 300268 637805820 - fig|344609.3.peg.4330, Shigella boydii BS512
 No SBO_0001 Ask/Hdh cd04257 cd04921/cd04922 1 0 0   2 Yes Yes No       absent 1 471 0.21 1.59 0.13
4 α Bacteria Proteobacteria Gammaproteobacteria-lower Enterobacteriales Enterobacteriaceae Shigella Shigella dysenteriae Sd197 Sdys_Ac 640427142 300267 640432437 - fig|216598.1.peg.2076, Shigella dysenteriae M131649
 Yes SDY_0002 Ask/Hdh cd04257 cd04921/cd04922 1 0 0   3 Yes Yes No       absent 1 471 0.21 1.6 0.13
4 α Bacteria Proteobacteria Gammaproteobacteria-lower Enterobacteriales Enterobacteriaceae Shigella Shigella flexneri 2a 2457T Sfle_Ac 637000263 198215 637422189 fig|198215.1.peg.2   fig|198214.1.peg.2, Shigella flexneri 2a str. 301
 Yes S0002 Ask/Hdh cd04257 cd04921/cd04922 1 0 0   3 Yes Yes No       absent 1 471 0.21 1.54 0.14
4 α Bacteria Proteobacteria Gammaproteobacteria-lower Enterobacteriales Enterobacteriaceae Shigella Shigella sonnei Ss046 Sson_Ac 640427143 300269 640427857 fig|300269.3.peg.62   fig|216599.1.peg.3714, Shigella sonnei 53G
 Yes SSON_0002 Ask/Hdh cd04257 cd04921/cd04922 1 0 0   3 Yes Yes No       absent 1 471 0.21 1.58 0.13
4 α Bacteria Proteobacteria Gammaproteobacteria-lower Enterobacteriales Enterobacteriaceae Sodalis Sodalis glossinidius morsitans Sglo_Ab 637000270 343509 637852336 fig|343509.6.peg.952   - Yes SG0404 Ask/Hdh cd04257 cd04921/cd04922 1 0 0   2 Yes Yes No       absent 1 471 0.21 1.33 0.16
4 α Bacteria Proteobacteria Gammaproteobacteria-lower Enterobacteriales Enterobacteriaceae Wigglesworthia Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis Wglo_Aa 637000338 36870 637341983 fig|36870.1.peg.589   - Yes WGLp591 Ask/Hdh cd04257   1 0 0   1 Yes No No       absent 1 492 0.2 0.84 0.24
4 α Bacteria Proteobacteria Gammaproteobacteria-lower Enterobacteriales Enterobacteriaceae Yersinia Yersinia enterocolitica enterocolitica 8081 Yent_Aa 640069335 393305 640074179 fig|630.2.peg.580   - Yes YE0600 Ask/Hdh cd04257 cd04921/cd04922 1 0 0   2 Yes Yes No       absent 1 471 0.21 1.36 0.15
4 α Bacteria Proteobacteria Gammaproteobacteria-lower Enterobacteriales Enterobacteriaceae Yersinia Yersinia pestis CO92 Ypes_Ab 637000351 214092 637199560 fig|214092.1.peg.617   fig|187410.1.peg.3665, Yersinia pestis KIM
fig|229193.1.peg.3590, Yersinia pestis biovar Medievalis str. 91001
fig|349746.3.peg.1093, Yersinia pestis Angola
fig|386656.4.peg.3124, Yersinia pestis Pestoides F
fig|360102.4.peg.4723, Yersinia pestis Antiqua
fig|377628.5.peg.494, Yersinia pestis Nepal516
 Yes YPO0459 Ask/Hdh cd04257 cd04921/cd04922 1 0 0   3 Yes Yes No       absent 1 471 0.21 1.36 0.15
4 α Bacteria Proteobacteria Gammaproteobacteria-lower Enterobacteriales Enterobacteriaceae Yersinia Yersinia pseudotuberculosis IP 32953 Ypse_Ab 637000355 273123 637532208 fig|273123.1.peg.728   fig|349747.3.peg.3239, Yersinia pseudotuberculosis IP 31758
fig|502800.3.peg.3557, Yersinia pseudotuberculosis YPIII
 Yes YPTB0602 Ask/Hdh cd04257 cd04921/cd04922 1 0 0   3 Yes Yes No       absent 1 471 0.21 1.35 0.16
4 α Bacteria Proteobacteria Gammaproteobacteria-lower Pasteurellales Pasteurellaceae Haemophilus Haemophilus influenzae 86-028NP Hinf_Aa 637000125 281310 637662054 fig|281310.3.peg.927   fig|71421.1.peg.88, Haemophilus influenzae Rd KW20
fig|262728.1.peg.1309, Haemophilus influenzae R2866
 Yes NTHI0167 Ask/Hdh cd04257 cd04921/cd04922 1 0 0   1 Yes Yes No       absent 2 471 0.42 1.14 0.37
4 α Bacteria Proteobacteria Gammaproteobacteria-lower Pasteurellales Pasteurellaceae Haemophilus Haemophilus somnus 129PT Hsom_Aa 637000127 205914 638104777 fig|205914.5.peg.1262   fig|228400.4.peg.356, Haemophilus somnus 2336
 Yes HS_1214 Ask/Hdh cd04257 cd04921/cd04922 1 0 0   1 Yes Yes No       absent 2 472 0.42 1.09 0.39
4 α Bacteria Proteobacteria Gammaproteobacteria-lower Pasteurellales Pasteurellaceae Mannheimia Mannheimia succiniciproducens MBEL55E Msuc_Ab 637000156 221988 637551233 fig|221988.1.peg.1597   - Yes MS1703 Ask/Hdh cd04257 cd04921/cd04922 1 0 0   2 Yes Yes No       absent 2 472 0.42 1.14 0.37
4 α Bacteria Proteobacteria Gammaproteobacteria-lower Pasteurellales Pasteurellaceae Pasteurella Pasteurella multocida multocida Pm70 Pmul_Ab 637000203 272843 637069694 fig|272843.1.peg.113   - Yes PM0113 Ask/Hdh cd04257 cd04921/cd04922 1 0 0   2 Yes Yes No       absent 2 471 0.42 1.17 0.36
4 α Bacteria Proteobacteria Gammaproteobacteria-lower Pasteurellales Pasteurellaceae Actinobacillus Actinobacillus pleuropneumoniae L20 Aple_Ab 640069302 416269 640121917 fig|416269.5.peg.239   fig|228399.1.peg.1512, Actinobacillus pleuropneumoniae serovar 1 str. 4074
 Yes APL_0250 Ask/Hdh cd04257 cd04921/cd04922 1 0 0   2 Yes Yes No       absent 2 471 0.42 1.14 0.37
4 α Bacteria Proteobacteria Gammaproteobacteria-lower Vibrionales Vibrionaceae Photobacterium Photobacterium profundum SS9 Ppro_Bd 637000206 298386 637585261 fig|298386.1.peg.2778   fig|314280.3.peg.1632, Photobacterium profundum 3TCK
 Yes PBPRA0552 Ask/Hdh cd04257 cd04921/cd04922 1 0 0   5 Yes Yes No       absent 1 471 0.21 1.28 0.16
4 α Bacteria Proteobacteria Gammaproteobacteria-lower Vibrionales Vibrionaceae Vibrio Vibrio cholerae O1 biovar eltor str. N16961 Vcho_Fd 637000333 243277 637048852 fig|243277.1.peg.4235   fig|412967.3.peg.1956, Vibrio cholerae MAK 757
fig|345073.6.peg.2551, Vibrio cholerae O395
fig|404974.3.peg.863, Vibrio cholerae AM-19226
fig|412883.3.peg.2593, Vibrio cholerae MZO-3
fig|88888881.3.peg.198, Vibrio cholerae NRT36s
 Yes VC2364 Ask/Hdh cd04257 cd04921/cd04922 1 0 0   5 Yes Yes No       absent 1 477 0.2 1.32 0.15
4 α Bacteria Proteobacteria Gammaproteobacteria-lower Vibrionales Vibrionaceae Vibrio Vibrio fischeri ES114 Vfis_Ae 637000334 312309 637636816 fig|312309.3.peg.2118   fig|388396.7.peg.2737, Vibrio fischeri MJ11
 Yes VF2118 Ask/Hdh cd04257 cd04921/cd04922 1 0 0   5 Yes Yes No       absent 1 471 0.21 1.18 0.18
4 α Bacteria Proteobacteria Gammaproteobacteria-lower Vibrionales Vibrionaceae Vibrio Vibrio parahaemolyticus RIMD 2210633 Vpar_Ae 637000335 223926 637397434 fig|223926.1.peg.494   - Yes VP0494 Ask/Hdh cd04257 cd04921/cd04922 1 0 0   5 Yes Yes No       absent 1 471 0.21 1.23 0.17
4 α Bacteria Proteobacteria Gammaproteobacteria-lower Vibrionales Vibrionaceae Vibrio Vibrio vulnificus CMCP6 Vvul_Ab 637000336 216895 637360958 fig|216895.1.peg.515   fig|196600.1.peg.5087, Vibrio vulnificus YJ016
 Yes VV10545 Ask/Hdh cd04257 cd04921/cd04922 1 0 0   4 Yes Yes No       absent 1 471 0.21 1.27 0.17
5 α Bacteria Bacteroidetes Bacteroidetes Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis NCTC 9343 Bfra_Ab 637000024 272559 637226305 fig|272559.3.peg.67   fig|817.1.peg.3591, Bacteroides fragilis 638R
fig|295405.3.peg.49, Bacteroides fragilis YCH46
 No BF0558 Ask/Hdh cd04257 cd04921/cd04922 1 0 0   3 Yes No Yes       absent 2 467 0.42 1.26 0.33
5 α Bacteria Bacteroidetes Bacteroidetes Bacteroidales Bacteroidaceae Bacteroides Bacteroides thetaiotaomicron VPI-5482 Bthe_Ab 637000026 226186 637410849 fig|226186.1.peg.2403   - No BT2403 Ask/Hdh cd04257 cd04921/cd04922 1 0 0   3 Yes No Yes       absent 2 467 0.42 1.36 0.31
5 α Bacteria Bacteroidetes Flavobacteria Flavobacteriales Flavobacteriaceae Flavobacterium Flavobacterium johnsoniae UW101 Fjoh_Ac 640427114 376686 640510815 fig|376686.6.peg.2564   - No Fjoh_2575 Ask/Hdh cd04243 cd04921/cd04922 1 0 0   3 Yes Yes Yes     640509711 absent 1 471 0.21 1.07 0.2
5 α Bacteria Bacteroidetes Flavobacteria Flavobacteriales Flavobacteriaceae Flavobacterium Flavobacterium johnsoniae UW101 Fjoh_Ab 640427114 376686 640509713 fig|376686.6.peg.1488   - No Fjoh_1494 Ask/Hdh cd04257 cd04921 1 0 0   3 Yes Yes Yes     640509711 absent 0 454 0 1.07 0
5 α Bacteria Bacteroidetes Flavobacteria Flavobacteriales Flavobacteriaceae Gramella Gramella forsetii KT0803 Gfor_Ac 639633025 411154 639718830 fig|411154.5.peg.1862   - No orf1951 Ask/Hdh cd04257 cd04921/cd04922 1 0 0   3 Yes Yes No     639717178 absent 2 471 0.42 1.03 0.41
5 α Bacteria Bacteroidetes Sphingobacteria Sphingobacteriales Flexibacteraceae Cytophaga Cytophaga hutchinsonii ATCC 33406 Chut_Ab 637000087 269798 638070073 fig|269798.12.peg.67   - No CHU_0073 Ask/Hdh cd04257 cd04921/cd04922 1 0 0   2 Yes Yes No       absent 2 470 0.42 1.08 0.39
5 α Bacteria Chlorobi Chlorobia Chlorobiales Chlorobiaceae Chlorobium Chlorobium chlorochromatii CaD3 Cchl_Ab 637000072 340177 637772669 fig|340177.8.peg.148   - No Cag_0142 Ask/Hdh cd04257 cd04921/cd04922 1 0 0   2 Yes No No       absent 1 473 0.21 1.01 0.21
5 α Bacteria Chlorobi Chlorobia Chlorobiales Chlorobiaceae Chlorobium Chlorobium phaeobacteroides DSM 266 Cpha_Ab 639633020 290317 639767107 fig|290317.7.peg.2658   - No Cpha266_2542 Ask/Hdh cd04257 cd04921/cd04922 1 0 0   2 Yes No No       absent 1 468 0.21 1.06 0.2
5 α Bacteria Chlorobi Chlorobia Chlorobiales Chlorobiaceae Chlorobium Chlorobium tepidum TLS Ctep_Ab 637000073 194439 637116968 fig|194439.1.peg.1999   - No CT2030 Ask/Hdh cd04257 cd04921/cd04922 1 0 0   2 Yes No No       absent 3 471 0.63 1.08 0.58
5 α Bacteria Chlorobi Chlorobia Chlorobiales Chlorobiaceae Pelodictyon Pelodictyon luteolum DSM 273 Plut_Ab 637000205 319225 637770014 fig|319225.3.peg.1963   - No Plut_1983 Ask/Hdh cd04257 cd04921/cd04922 1 0 0   2 Yes No No       absent 3 472 0.63 1.05 0.6
5 α Bacteria Chlorobi Chlorobia Chlorobiales Chlorobiaceae Prosthecochloris Prosthecochloris vibrioformis DSM 265 Pvib_Ab 640427130 290318 640454058 fig|290318.4.peg.1607   - No Cvib_1626 Ask/Hdh cd04257 cd04921/cd04922 1 0 0   2 Yes No No       absent 3 472 0.63 1.02 0.62
6 α Bacteria Bacteroidetes Flavobacteria Flavobacteriales Flavobacteriaceae Flavobacterium Flavobacterium johnsoniae UW101 Fjoh_Aa 640427114 376686 640508746 fig|376686.6.peg.532   - No Fjoh_0535   cd04243   1 0 0   3 Yes Yes Yes     640509711 absent 3 419 0.71 1.07 0.66
6 α Bacteria Bacteroidetes Flavobacteria Flavobacteriales Flavobacteriaceae Gramella Gramella forsetii KT0803 Gfor_Aa 639633025 411154 639720378 fig|411154.5.peg.3320   - No orf3473   cd04243   1 0 0   3 Yes Yes No     639717178 absent 3 417 0.71 1.03 0.69
7 α Bacteria Bacteroidetes Sphingobacteria Sphingobacteriales Crenotrichaceae Salinibacter Salinibacter ruber DSM 13855 Srub_Ac 637000250 309807 637843688 fig|309807.5.peg.640   - No SRU_0691 Ask/Hdh cd04257 cd04921/cd04922 1 0 0   4 Yes No No     637843485 absent 5 478 1.04 1.25 0.83
7 α Bacteria Proteobacteria Gammaproteobacteria-upper Thiotrichales Francisellaceae Francisella Francisella tularensis novicida U112 Ftul_Ab 639633024 401614 639752570 fig|401614.5.peg.517   fig|393011.11.peg.523, Francisella tularensis subsp. holarctica OSU18
fig|393115.8.peg.448, Francisella tularensis subsp. tularensis FSC198
fig|418136.4.peg.1584, Francisella tularensis subsp. tularensis WY96-3418
fig|458234.10.peg.514, Francisella tularensis subsp. holarctica FTA
 Yes FTN_0525 Ask/Hdh cd04257 cd04921/cd04922 1 0 0   2 Yes No No       absent 3 463 0.64 0.91 0.7
7 α Bacteria Proteobacteria Gammaproteobacteria-upper Xanthomonadales Xanthomonadaceae Xanthomonas Xanthomonas axonopodis pv. citri 306 Xaxo_Ab 637000342 190486 637295069 fig|190486.1.peg.1790   - Yes XAC1820 Ask/Hdh cd04257 cd04921/cd04922 1 0 0   2 Yes No No     637296287 absent 7 486 1.44 1.58 0.91
7 α Bacteria Proteobacteria Gammaproteobacteria-upper Xanthomonadales Xanthomonadaceae Xanthomonas Xanthomonas campestris pv. campestris ATCC 33913 Xcam_Ab 637000344 190485 637273904 fig|190485.1.peg.1770   fig|314565.3.peg.1693, Xanthomonas campestris pv. campestris str. 8004
fig|316273.3.peg.2221, Xanthomonas campestris pv. vesicatoria str. 85-10
 Yes XCC1800 Ask/Hdh cd04257 cd04921/cd04922 1 0 0   2 Yes No No     637274959 absent 7 486 1.44 1.59 0.91
7 α Bacteria Proteobacteria Gammaproteobacteria-upper Xanthomonadales Xanthomonadaceae Xanthomonas Xanthomonas oryzae pv. oryzae KACC10331 Xory_Aa 637000346 291331 637632478 fig|291331.3.peg.3247   - Yes XOO2242 Ask/Hdh cd04257 cd04921/cd04922 1 0 0   2 Yes No No     637632098 absent 7 497 1.4 1.62 0.86
7 α Bacteria Proteobacteria Gammaproteobacteria-upper Xanthomonadales Xanthomonadaceae Xylella Xylella fastidiosa Temecula1 Xfas_Aa 637000349 183190 637384081 fig|183190.1.peg.1216   fig|155920.1.peg.1498, Xylella fastidiosa Ann-1
fig|160492.1.peg.2211, Xylella fastidiosa 9a5c
fig|405440.3.peg.1294, Xylella fastidiosa M12
 Yes PD1273 Ask/Hdh cd04257 cd04921/cd04922 1 0 0   2 Yes No No       absent 7 479 1.46 1.45 1.01
7 α Eukaryota Streptophyta rosids Brassicales Brassicaceae Arabidopsis Arabidopsis thaliana Columbia Atha_d 639560100 3702 639576220 fig|3702.1.peg.19799   - Yes AT4G19710 Ask/Hdh cd04257 cd04921/cd04922 1 0 0   5 Yes Yes No     639580575 absent 6 563 1.06 1.25 0.85
7 α Eukaryota Streptophyta rosids Brassicales Brassicaceae Arabidopsis Arabidopsis thaliana Columbia Atha_e 639560100 3702 639587599 fig|3702.1.peg.3465   - Yes AT1G31230 Ask/Hdh cd04257 cd04921/cd04922 1 0 0   5 Yes Yes No     639580575 absent 6 558 1.07 1.25 0.86
8 α Bacteria Proteobacteria Gammaproteobacteria-lower Aeromonadales Aeromonadaceae Aeromonas Aeromonas hydrophila hydrophila ATCC 7966 Ahyd_Ad 639633004 380703 639713170 fig|380703.5.peg.564   - No AHA_0590 Ask/Hdh cd04257   1 0 0   4 Yes Yes No       absent 3 478 0.62 1.47 0.42
8 α Bacteria Proteobacteria Gammaproteobacteria-lower Aeromonadales Aeromonadaceae Aeromonas Aeromonas salmonicida salmonicida A449 Asal_Ac 641522605 382245 640466677 fig|382245.6.peg.3558   - No ASA_3796 Ask/Hdh cd04257   1 0 0   4 Yes Yes No       absent 3 458 0.65 1.51 0.43
8 α Bacteria Proteobacteria Gammaproteobacteria-lower Alteromonadales Colwelliaceae Colwellia Colwellia psychrerythraea 34H Cpsy_Ac 637000081 167879 637282921 fig|167879.3.peg.574   - No CPS_0456 Ask/Hdh cd04257   1 0 0   3 Yes Yes No       absent 4 471 0.84 1.12 0.75
8 α Bacteria Proteobacteria Gammaproteobacteria-lower Alteromonadales Idiomarinaceae Idiomarina Idiomarina loihiensis L2TR Iloi_Ab 637000136 283942 637607026 fig|283942.3.peg.2453   - No IL2466 Ask/Hdh cd04257   1 0 0   2 Yes No No       absent 7 461 1.51 1.36 1.11
8 α Bacteria Proteobacteria Gammaproteobacteria-lower Alteromonadales Pseudoalteromonadaceae Pseudoalteromona Pseudoalteromonas haloplanktis TAC125 Phal_Ac 637000217 326442 637735651 fig|326442.4.peg.2250   - No PSHAa2722 Ask/Hdh cd04257   1 0 0   4 Yes Yes No       absent 3 433 0.69 1.1 0.63
8 α Bacteria Proteobacteria Gammaproteobacteria-lower Alteromonadales Shewanellaceae Shewanella Shewanella amazonensis SB2B Sama_Ac 639633057 326297 639782586 fig|326297.7.peg.2982   - No Sama_3170 Ask/Hdh cd04257   1 0 0   4 Yes Yes No       absent 4 445 0.89 1.27 0.7
8 α Bacteria Proteobacteria Gammaproteobacteria-lower Alteromonadales Shewanellaceae Shewanella Shewanella baltica OS155 Sbal_Ac 640069330 325240 640121041 fig|325240.9.peg.4167   fig|399599.3.peg.572, Shewanella baltica OS195
fig|402882.10.peg.619, Shewanella baltica OS185
 No Sbal_3775 Ask/Hdh cd04257   1 0 0   4 Yes Yes No       absent 4 445 0.89 1.25 0.71
8 α Bacteria Proteobacteria Gammaproteobacteria-lower Alteromonadales Shewanellaceae Shewanella Shewanella denitrificans OS217 Sden_Ac 637000256 318161 637954601 fig|318161.14.peg.600   - No Sden_0616 Ask/Hdh cd04257   1 0 0   3 Yes Yes No       absent 4 461 0.86 1.19 0.72
8 α Bacteria Proteobacteria Gammaproteobacteria-lower Alteromonadales Shewanellaceae Shewanella Shewanella frigidimarina NCIMB 400 Sfri_Aa 637000257 318167 638136362 fig|318167.10.peg.3380   - No Sfri_3550 Ask/Hdh cd04257   1 0 0   3 Yes Yes No       absent 4 445 0.89 1.18 0.75
8 α Bacteria Proteobacteria Gammaproteobacteria-lower Alteromonadales Shewanellaceae Shewanella Shewanella loihica PV-4 Sloi_Ab 640069331 323850 640162050 fig|323850.3.peg.3078   - No Shew_0521 Ask/Hdh cd04257   1 0 0   3 Yes Yes No       absent 4 445 0.89 1.21 0.74
8 α Bacteria Proteobacteria Gammaproteobacteria-lower Alteromonadales Shewanellaceae Shewanella Shewanella oneidensis MR-1 Sone_Ac 637000258 211586 637345799 fig|211586.1.peg.3680   - No SO4055 Ask/Hdh cd04257   1 0 0   4 Yes Yes No       absent 4 445 0.89 1.28 0.7
8 α Bacteria Proteobacteria Gammaproteobacteria-lower Alteromonadales Shewanellaceae Shewanella Shewanella putrefaciens CN-32 Sput_Ac 640427141 319224 640497743 fig|319224.13.peg.554   - No Sputcn32_0617 Ask/Hdh cd04257   1 0 0   4 Yes Yes No       absent 4 445 0.89 1.23 0.72
8 α Bacteria Proteobacteria Gammaproteobacteria-lower Alteromonadales Shewanellaceae Shewanella Shewanella sp. ANA-3 SHEW-3c 639633058 94122 639728221 fig|94122.5.peg.3605   fig|351745.7.peg.3291, Shewanella sp. W3-18-1
 No Shewana3_3613 Ask/Hdh cd04257   1 0 0   4 Yes Yes No       absent 4 445 0.89 1.25 0.71
8 α Bacteria Proteobacteria Gammaproteobacteria-lower Enterobacteriales Enterobacteriaceae Enterobacter Enterobacter sp. 638 ENTE-2b 640427113 399742 640494259 fig|399742.4.peg.3836   - No Ent638_4034 Ask/Hdh cd04257   1 0 0   3 Yes Yes No       absent 6 464 1.29 1.52 0.85
8 α Bacteria Proteobacteria Gammaproteobacteria-lower Enterobacteriales Enterobacteriaceae Erwinia Erwinia carotovora atroseptica SCRI1043 Patr_Ab 637000102 218491 637380755 fig|218491.3.peg.496   - No ECA4251 Ask/Hdh cd04257   1 0 0   3 Yes Yes No       absent 5 465 1.07 1.38 0.78
8 α Bacteria Proteobacteria Gammaproteobacteria-lower Enterobacteriales Enterobacteriaceae Escherichia Escherichia coli K12 Ecol_Ab 637000106 83333 637017265 fig|83333.1.peg.3859   fig|316407.3.peg.3205, Escherichia coli W3110
fig|331111.3.peg.2094, Escherichia coli E24377A
fig|331112.3.peg.3897, Escherichia coli HS
fig|340184.3.peg.4048, Escherichia coli B7A
fig|340185.3.peg.2265, Escherichia coli E22
fig|344601.3.peg.3752, Escherichia coli B171
fig|344610.3.peg.2178, Escherichia coli 53638
fig|83334.1.peg.4845, Escherichia coli O157:H7
fig|155864.1.peg.4885, Escherichia coli O157:H7 EDL933
fig|340186.3.peg.1247, Escherichia coli E110019
fig|481805.3.peg.4383, Escherichia coli ATCC 8739
 No b3940 Ask/Hdh cd04257   1 0 0   3 Yes Yes No       absent 6 464 1.29 1.53 0.84
8 α Bacteria Proteobacteria Gammaproteobacteria-lower Enterobacteriales Enterobacteriaceae Photorhabdus Photorhabdus luminescens laumondii TTO1 Plum_Ab 637000207 243265 637466492 fig|243265.1.peg.4538   - No plu4755 Ask/Hdh cd04257   1 0 0   3 Yes Yes No       absent 5 465 1.07 1.35 0.79
8 α Bacteria Proteobacteria Gammaproteobacteria-lower Enterobacteriales Enterobacteriaceae Salmonella Salmonella enterica enterica sv Typhi Ty2 Sent_Nb 637000253 209261 637407206 fig|209261.1.peg.3275   fig|220341.1.peg.3342, Salmonella enterica subsp. enterica serovar Typhi str. CT18
fig|321314.4.peg.3491, Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67
fig|594.1.peg.4243, Salmonella enterica subsp. enterica serovar Gallinarum
fig|295319.3.peg.3875, Salmonella enterica subsp. enterica serovar Paratypi A str. ATCC 9150
 No t3517 Ask/Hdh cd04257   1 0 0   3 Yes Yes No       absent 6 464 1.29 1.53 0.84
8 α Bacteria Proteobacteria Gammaproteobacteria-lower Enterobacteriales Enterobacteriaceae Salmonella Salmonella typhimurium LT2 Styp_Ab 637000255 99287 637214797 fig|99287.1.peg.3955   - No STM4101 Ask/Hdh cd04257   1 0 0   3 Yes Yes No       absent 6 464 1.29 1.52 0.85
8 α Bacteria Proteobacteria Gammaproteobacteria-lower Enterobacteriales Enterobacteriaceae Shigella Shigella dysenteriae Sd197 Sdys_Ab 640427142 300267 640436000 - fig|216598.1.peg.398, Shigella dysenteriae M131649
 Yes SDY_3775 Ask/Hdh cd04257   1 0 0   3 Yes Yes No       absent 6 464 1.29 1.6 0.81
8 α Bacteria Proteobacteria Gammaproteobacteria-lower Enterobacteriales Enterobacteriaceae Shigella Shigella flexneri 2a 2457T Sfle_Ab 637000263 198215 637425477 fig|198215.1.peg.3196   fig|198214.1.peg.3784, Shigella flexneri 2a str. 301
 No S3729 Ask/Hdh cd04257   1 0 0   3 Yes Yes No       absent 6 464 1.29 1.54 0.84
8 α Bacteria Proteobacteria Gammaproteobacteria-lower Enterobacteriales Enterobacteriaceae Shigella Shigella sonnei Ss046 Sson_Ab 640427143 300269 640431783 fig|300269.3.peg.2930   fig|216599.1.peg.3246, Shigella sonnei 53G
 No SSON_4114 Ask/Hdh cd04257   1 0 0   3 Yes Yes No       absent 6 464 1.29 1.58 0.82
8 α Bacteria Proteobacteria Gammaproteobacteria-lower Enterobacteriales Enterobacteriaceae Yersinia Yersinia enterocolitica enterocolitica 8081 Yent_Ab 640069335 393305 640073688 fig|630.2.peg.112   - No YE0112 Ask/Hdh cd04257   1 0 0   2 Yes Yes No       absent 5 465 1.07 1.36 0.79
8 α Bacteria Proteobacteria Gammaproteobacteria-lower Enterobacteriales Enterobacteriaceae Yersinia Yersinia pestis CO92 Ypes_Ac 637000351 214092 637199230 fig|214092.1.peg.290   fig|187410.1.peg.296, Yersinia pestis KIM
fig|229193.1.peg.116, Yersinia pestis biovar Medievalis str. 91001
fig|386656.4.peg.3714, Yersinia pestis Pestoides F
fig|360102.4.peg.508, Yersinia pestis Antiqua
fig|377628.5.peg.4310, Yersinia pestis Nepal516
 No YPO0116 Ask/Hdh cd04257   1 0 0   3 Yes Yes No       absent 5 465 1.07 1.36 0.79
8 α Bacteria Proteobacteria Gammaproteobacteria-lower Enterobacteriales Enterobacteriaceae Yersinia Yersinia pseudotuberculosis IP 32953 Ypse_Ac 637000355 273123 637531686 fig|273123.1.peg.241   fig|349747.3.peg.2417, Yersinia pseudotuberculosis IP 31758
fig|502800.3.peg.4039, Yersinia pseudotuberculosis YPIII
 No YPTB0106 Ask/Hdh cd04257   1 0 0   3 Yes Yes No       absent 5 465 1.07 1.35 0.79
8 α Bacteria Proteobacteria Gammaproteobacteria-lower Vibrionales Vibrionaceae Photobacterium Photobacterium profundum SS9 Ppro_Be 637000206 298386 637584971 fig|298386.1.peg.2485   fig|314280.3.peg.5300, Photobacterium profundum 3TCK
 No PBPRA0262 Ask/Hdh cd04257   1 0 0   5 Yes Yes No       absent 3 455 0.65 1.28 0.51
8 α Bacteria Proteobacteria Gammaproteobacteria-lower Vibrionales Vibrionaceae Vibrio Vibrio cholerae O1 biovar eltor str. N16961 Vcho_Fc 637000333 243277 637049178 fig|243277.1.peg.2653   fig|345072.3.peg.2492, Vibrio cholerae MO10
fig|345073.6.peg.2833, Vibrio cholerae O395
fig|412967.3.peg.523, Vibrio cholerae MAK 757
fig|404974.3.peg.766, Vibrio cholerae AM-19226
 No VC2684 Ask/Hdh cd04257   1 0 0   5 Yes Yes No       absent 3 456 0.65 1.32 0.49
8 α Bacteria Proteobacteria Gammaproteobacteria-lower Vibrionales Vibrionaceae Vibrio Vibrio fischeri ES114 Vfis_Ad 637000334 312309 637636979 fig|312309.3.peg.2266   fig|388396.7.peg.974, Vibrio fischeri MJ11
 No VF2266 Ask/Hdh cd04257   1 0 0   5 Yes Yes No       absent 4 458 0.87 1.18 0.74
8 α Bacteria Proteobacteria Gammaproteobacteria-lower Vibrionales Vibrionaceae Vibrio Vibrio parahaemolyticus RIMD 2210633 Vpar_Ad 637000335 223926 637399786 fig|223926.1.peg.2764   - No VP2764 Ask/Hdh cd04257   1 0 0   5 Yes Yes No       absent 2 456 0.43 1.23 0.35
8 α Bacteria Proteobacteria Gammaproteobacteria-lower Vibrionales Vibrionaceae Vibrio Vibrio vulnificus CMCP6 Vvul_Aa 637000336 216895 637361735 fig|216895.1.peg.1255   fig|196600.1.peg.3073, Vibrio vulnificus YJ016
 No VV11365 Ask/Hdh cd04257   1 0 0   4 Yes Yes No       absent 2 456 0.43 1.27 0.34
9 α Bacteria Bacteroidetes Sphingobacteria Sphingobacteriales Crenotrichaceae Salinibacter Salinibacter ruber DSM 13855 Srub_Ad 637000250 309807 637843304 fig|309807.5.peg.269   - No SRU_0301 Ask/DAP decarboxylase cd04259   1 0 0   4 Yes No No     637843485 absent 9 497 1.81 1.25 1.45
9 α Bacteria Proteobacteria Alphaproteobacteria Rhodobacterales Hyphomonadaceae Maricaulis Maricaulis maris MCS10 Mmar_Ab 637000157 394221 638139870 fig|394221.5.peg.388   - Yes Mmar10_0407 Ask/DAP decarboxylase cd04259 cd04935/cd04920 1 0 0   3 Yes No No     638142117 absent 9 506 1.77 1.43 1.24
9 α Bacteria Proteobacteria Gammaproteobacteria-upper Legionellales Legionellaceae Legionella Legionella pneumophila pneumophila Philadelphia Lpne_Aa 637000148 272624 637131750 fig|272624.3.peg.646   fig|297245.3.peg.2054, Legionella pneumophila str. Lens
fig|297246.3.peg.2833, Legionella pneumophila str. Paris
fig|400673.6.peg.1276, Legionella pneumophila str. Corby
 Yes lpg1811 Ask/DAP decarboxylase cd04259 cd04935/cd04920 1 0 0   1 No No No       absent 8 507 1.57 1.15 1.37
9 α Bacteria Proteobacteria Gammaproteobacteria-upper Xanthomonadales Xanthomonadaceae Xanthomonas Xanthomonas axonopodis pv. citri 306 Xaxo_Aa 637000342 190486 637296160 fig|190486.1.peg.2864   - Yes XAC2911 Ask/DAP decarboxylase cd04259 cd04935/cd04920 1 0 0   2 Yes No No     637296287 absent 14 512 2.73 1.58 1.73
9 α Bacteria Proteobacteria Gammaproteobacteria-upper Xanthomonadales Xanthomonadaceae Xanthomonas Xanthomonas campestris pv. campestris ATCC 33913 Xcam_Aa 637000344 190485 637274845 fig|190485.1.peg.2694   fig|314565.3.peg.200, Xanthomonas campestris pv. campestris str. 8004
fig|316273.3.peg.3125, Xanthomonas campestris pv. vesicatoria str. 85-10
 Yes XCC2741 Ask/DAP decarboxylase cd04259 cd04935/cd04920 1 0 0   2 Yes No No     637274959 absent 14 512 2.73 1.59 1.72
9 α Bacteria Proteobacteria Gammaproteobacteria-upper Xanthomonadales Xanthomonadaceae Xanthomonas Xanthomonas oryzae pv. oryzae KACC10331 Xory_Ab 637000346 291331 637631754 fig|291331.3.peg.3410   - Yes XOO1433 Ask/DAP decarboxylase cd04259 cd04935/cd04920 1 0 0   2 Yes No No     637632098 absent 14 512 2.73 1.62 1.69
9 α Bacteria Proteobacteria Gammaproteobacteria-upper Xanthomonadales Xanthomonadaceae Xylella Xylella fastidiosa Temecula1 Xfas_Ab 637000349 183190 637383234 fig|183190.1.peg.382   fig|155920.1.peg.1233, Xylella fastidiosa Ann-1
fig|160492.1.peg.1113, Xylella fastidiosa 9a5c
fig|405440.3.peg.418, Xylella fastidiosa M12
 Yes PD0408 Ask/DAP decarboxylase cd04259 cd04935/cd04920 1 0 0   2 Yes No No       absent 14 514 2.72 1.45 1.88
9 α Bacteria Proteobacteria Alphaproteobacteria Rhodobacterales Hyphomonadaceae Oceanicaulis Oceanicaulis alexandrii HTCC2633 Oale_Ab 638341138 314254 638891165 fig|314254.3.peg.404   - Yes OA2633_13100 Ask/DAP decarboxylase cd04259 cd04935/cd04920 1 0 0   3 Yes No No     638891809 absent 4 465 0.86 1.31 0.66
10 α Bacteria Chlorobi Chlorobia Chlorobiales Chlorobiaceae Chlorobium Chlorobium chlorochromatii CaD3 Cchl_Aa 637000072 340177 637774560 fig|340177.8.peg.2077   - No Cag_2023   cd04258 cd04912/cd04917 1 0 0   2 Yes No No       absent 3 471 0.63 1.01 0.62
10 α Bacteria Chlorobi Chlorobia Chlorobiales Chlorobiaceae Chlorobium Chlorobium phaeobacteroides DSM 266 Cpha_Aa 639633020 290317 639767148 fig|290317.7.peg.2702   - No Cpha266_2583   cd04258 cd04912/cd04917 1 0 0   2 Yes No No       absent 3 471 0.63 1.06 0.59
10 α Bacteria Chlorobi Chlorobia Chlorobiales Chlorobiaceae Chlorobium Chlorobium tepidum TLS Ctep_Aa 637000073 194439 637115017 fig|194439.1.peg.95   - No CT0095   cd04258 cd04912/cd04892 1 0 0   2 Yes No No       absent 4 470 0.85 1.08 0.79
10 α Bacteria Chlorobi Chlorobia Chlorobiales Chlorobiaceae Pelodictyon Pelodictyon luteolum DSM 273 Plut_Aa 637000205 319225 637770091 fig|319225.3.peg.2040   - No Plut_2060   cd04258 cd04912/cd04892 1 0 0   2 Yes No No       absent 4 471 0.84 1.05 0.8
10 α Bacteria Chlorobi Chlorobia Chlorobiales Chlorobiaceae Prosthecochloris Prosthecochloris vibrioformis DSM 265 Pvib_Aa 640427130 290318 640454134 fig|290318.4.peg.1683   - No Cvib_1702   cd04258 cd04912/cd04892 1 0 0   2 Yes No No       absent 4 471 0.84 1.02 0.82
11 α Bacteria Bacteroidetes Bacteroidetes Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis NCTC 9343 Bfra_Aa 637000024 272559 637228568 fig|272559.3.peg.2881   fig|295405.3.peg.3359, Bacteroides fragilis YCH46
 No BF2886   cd04243 cd04912/cd04917 1 0 0   3 Yes No Yes       absent 2 439 0.45 1.26 0.36
11 α Bacteria Bacteroidetes Bacteroidetes Bacteroidales Bacteroidaceae Bacteroides Bacteroides thetaiotaomicron VPI-5482 Bthe_Aa 637000026 226186 637409806 fig|226186.1.peg.1375   - No BT1375   cd04243 cd04912/cd04917 1 0 0   3 Yes No Yes       absent 2 439 0.45 1.36 0.33
11 α Bacteria Bacteroidetes Bacteroidetes Bacteroidales Porphyromonadaceae Porphyromonas Porphyromonas gingivalis W83 Pgin_Aa 637000209 242619 637150757 fig|242619.1.peg.1878   - No PG2189   cd04243 cd04912/cd04917 1 0 0   1 No No No       absent 3 446 0.67 1.03 0.65
11 α Bacteria Bacteroidetes Flavobacteria Flavobacteriales Flavobacteriaceae Gramella Gramella forsetii KT0803 Gfor_Ab 639633025 411154 639718410 fig|411154.5.peg.1464   - No orf1536   cd04243 cd04912/cd04917 1 0 0   3 Yes Yes No     639717178 absent 2 444 0.45 1.03 0.44
11 α Bacteria Bacteroidetes Sphingobacteria Sphingobacteriales Flexibacteraceae Cytophaga Cytophaga hutchinsonii ATCC 33406 Chut_Aa 637000087 269798 638073708 fig|269798.12.peg.3547   - No CHU_3721   cd04243 cd04912/cd04917 1 0 0   2 Yes Yes No       absent 1 444 0.22 1.08 0.2
11 α Bacteria Bacteroidetes Bacteroidetes Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis NCTC 9343 Bfra_Ac 637000024 272559 637226273 fig|272559.3.peg.584   fig|817.1.peg.3627, Bacteroides fragilis 638R
fig|295405.3.peg.664, Bacteroides fragilis YCH46
 No BF0526   cd04243 cd04912/cd04917 KFGK 0 0   3 Yes No Yes       absent 4 472 0.84 1.26 0.67
11 α Bacteria Bacteroidetes Bacteroidetes Bacteroidales Bacteroidaceae Bacteroides Bacteroides thetaiotaomicron VPI-5482 Bthe_Ac 637000026 226186 637410344 fig|226186.1.peg.1901   - No BT1901   cd04243 cd00000cd04917 KFEK 0 0   3 Yes No Yes       absent 3 436 0.68 1.36 0.5
12 α Bacteria Acidobacteria Acidobacteria Acidobacteriales Acidobacteriaceae   Acidobacteria bacterium Ellin345 ACID-2a 637000001 204669 637984508 fig|204669.6.peg.2478   - No Acid345_2491   cd04243 cd04912/cd04892 1 0 0   2 Yes No No 637983490   637986196 absent 1 456 0.21 1.35 0.16
12 α Bacteria Acidobacteria Acidobacteria Acidobacteriales Acidobacteriaceae   Acidobacteria bacterium Ellin345 ACID-2b 637000001 204669 637983491 fig|204669.6.peg.1471   - No Acid345_1482   cd04243 cd04912/cd04892 1 0 0   2 Yes No No 637983490   637986196 absent 2 469 0.42 1.35 0.31
12 α Bacteria Acidobacteria Solibacteres Solibacterales Solibacteraceae Solibacter Solibacter usitatus Ellin6076 Susi_Aa 639633060 234267 639686479 fig|234267.9.peg.6617   - No Acid_6982   cd04258 cd04912/cd04917 1 0 0   2 Yes No No 639680070   639686527 absent 1 463 0.21 1.47 0.14
13 α Eukaryota Streptophyta rosids Brassicales Brassicaceae Arabidopsis Arabidopsis thaliana Columbia Atha_a 639560100 3702 639579615 fig|3702.1.peg.23535   - No AT5G14060   cd04244 cd04933/cd04918 1 0 0   5 Yes Yes No     639580575 absent 4 544 0.73 1.25 0.58
13 α Eukaryota Streptophyta rosids Brassicales Brassicaceae Arabidopsis Arabidopsis thaliana Columbia Atha_c 639560100 3702 639571187 fig|3702.1.peg.12136   - No AT3G02020   cd04244 cd04933/cd04918 1 0 0   5 Yes Yes No     639580575 absent 3 559 0.53 1.25 0.42
13 α Eukaryota Streptophyta rosids Brassicales Brassicaceae Arabidopsis Arabidopsis thaliana Columbia Atha_b 639560100 3702 639579531 fig|3702.1.peg.23445   - No AT5G13280   cd04244 cd04933/cd04918 1 0 0 2cdq 5 Yes Yes No     639580575 absent 4 569 0.7 1.25 0.56
14 α Archaea Euryarchaeota Archaeoglobi Archaeoglobales Archaeoglobaceae Archaeoglobus Archaeoglobus fulgidus DSM 4304 Aful_Aa 638154502 224325 638157227 fig|224325.1.peg.693   - No AF0700   cd04244 cd04921/cd04924 1 0 0   1 Yes No Yes     638157474 absent 2 462 0.43 1.04 0.41
14 α Archaea Euryarchaeota environmental sample unclassified unclassified uncultured uncultured methanogenic archaeon RC-I Umet_Aa 640427153 351160 640535568 - - No RCIX1827   cd04244 cd04921/cd04924 1 0 0   1 Yes No Yes     640537168 absent 1 467 0.21 0.94 0.22
14 α Archaea Euryarchaeota Methanomicrobia Methanosarcinales Methanosaetaceae Methanosaeta Methanosaeta thermophila PT Mthe-2_Aa 639633038 349307 639700270 fig|349307.9.peg.1229   - No Mthe_1253   cd04244 cd04921/cd04924 1 0 0   1 Yes No Yes     639699864 absent 2 465 0.43 1.05 0.41
14 α Archaea Euryarchaeota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanococcoides Methanococcoides burtonii DSM 6242 Mbur_Aa 637000161 259564 637959721 fig|259564.8.peg.1892   - No Mbur_1980   cd04244 cd04921/cd04924 1 0 0   1 Yes No Yes     637958859 absent 2 469 0.42 0.87 0.48
14 α Archaea Euryarchaeota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanosarcina Methanosarcina acetivorans C2A Mace_Aa 638154508 188937 638174861 fig|188937.1.peg.131   - No MA0131   cd04244 cd04921/cd04924 1 0 0   1 Yes No Yes     638177380 absent 2 472 0.42 1.06 0.4
14 α Archaea Euryarchaeota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanosarcina Methanosarcina barkeri fusaro Mbar_Aa 637000162 269797 637699748 fig|269797.3.peg.335   fig|2208.1.peg.3811, Methanosarcina barkeri
 No Mbar_A086   cd04244 cd04921/cd04924 1 0 0   1 Yes No Yes     637700779 absent 2 472 0.42 1.04 0.4
14 α Archaea Euryarchaeota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanosarcina Methanosarcina mazei Go1 Mmaz_Aa 638154509 192952 638165942 fig|192952.1.peg.1417   - No MM1417   cd04244 cd04921/cd04924 1 0 0   1 Yes No Yes     638167288 absent 2 479 0.41 0.94 0.44
15 α Archaea Euryarchaeota Methanomicrobia Methanomicrobiales Methanomicrobiaceae Methanoculleus Methanoculleus marisnigri JR1 Mmar-6_Aa 640069318 368407 640114892 fig|368407.6.peg.221   - No Memar_0222   cd04244 cd04921/cd04924 1 0 0   1 Yes No Yes     640115657 absent 2 462 0.43 1 0.43
15 α Archaea Euryarchaeota Methanomicrobia Methanomicrobiales Methanospirillaceae Methanospirillum Methanospirillum hungatei JF-1 Mhun_Aa 637000164 323259 637898663 fig|323259.5.peg.3196   - No Mhun_3054   cd04244 cd04921/cd04924 1 0 0   1 Yes No Yes     637897902 absent 3 465 0.64 1.05 0.61
16 α Archaea Euryarchaeota Methanococci Methanococcales Methanocaldococcaceae Methanocaldococc Methanocaldococcus jannaschii DSM 2661 Mjan_Aa 638154505 243232 638201890 fig|243232.1.peg.587   - No MJ0571   cd04244 cd04921/cd04892 1 0 0 2hmf/3c1m/3c1n 1 Yes No Yes     638203005 absent 1 473 0.21 0.73 0.29
16 α Archaea Euryarchaeota Methanococci Methanococcales Methanococcaceae Methanococcus Methanococcus maripaludis C5 Mmar-5_Aa 640069316 402880 640166081 fig|402880.8.peg.574   fig|267377.1.peg.1017, Methanococcus maripaludis S2
fig|426368.9.peg.267, Methanococcus maripaludis C7
fig|444158.3.peg.1627, Methanococcus maripaludis C6
 No MmarC5_0577   cd04244 cd04921/cd04892 1 0 0   1 Yes No Yes     640167220 absent 1 468 0.21 0.65 0.32
17 α Bacteria Deinococcus-Th Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus geothermalis DSM 11300 Dgeo_Aa 641228488 319795 641230142 fig|68909.1.peg.2114   - No Dgeo_1127   cd04244 cd00000cd04892 1 0 0   1 Yes Yes No     641229624 absent 2 470 0.42 1.38 0.3
17 α Bacteria Deinococcus-Th Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus radiodurans R1 Drad_Aa 637000092 243230 637035689 fig|243230.1.peg.1547   - No DR1365   cd04244 cd00000cd04892 1 0 0   1 Yes Yes No     637035602 absent 2 473 0.42 1.38 0.3
18 α Archaea Euryarchaeota Thermococci Thermococcales Thermococcaceae Pyrococcus Pyrococcus abyssi GE5 Paby_Aa 638154514 272844 638200418 fig|272844.1.peg.1088   - No PAB1674   cd04234   1 0 0   2 Yes No No     638200276 absent 4 368 1.08 1.18 0.92
18 α Archaea Euryarchaeota Thermococci Thermococcales Thermococcaceae Pyrococcus Pyrococcus abyssi GE5 Paby_Ab 638154514 272844 638200417 fig|272844.1.peg.1087   - No PAB1675   cd04234   1 0 0   2 Yes No No     638200276 absent 3 352 0.85 1.18 0.72
18 α Archaea Euryarchaeota Thermococci Thermococcales Thermococcaceae Pyrococcus Pyrococcus furiosus DSM 3638 Pfur_Aa 638154515 186497 638173617 fig|186497.1.peg.1090   - No PF1053   cd04234   1 0 0   2 Yes No No     638173671 absent 2 359 0.55 1.23 0.45
18 α Archaea Euryarchaeota Thermococci Thermococcales Thermococcaceae Pyrococcus Pyrococcus furiosus DSM 3638 Pfur_Ab 638154515 186497 638173616 fig|186497.1.peg.1089   - No PF1052   cd04234   1 0 0   2 Yes No No     638173671 absent 4 373 1.07 1.23 0.87
18 α Archaea Euryarchaeota Thermococci Thermococcales Thermococcaceae Pyrococcus Pyrococcus horikoshii OT3 Phor_Aa 638154516 70601 638186593 fig|70601.1.peg.1060   - No PH1086   cd04234   1 0 0   2 Yes No No     638186581 absent 4 346 1.15 1.18 0.97
18 α Archaea Euryarchaeota Thermococci Thermococcales Thermococcaceae Pyrococcus Pyrococcus horikoshii OT3 Phor_Ab 638154516 70601 638186340 fig|70601.1.peg.838   - No PH0858   cd04234   1 0 0   2 Yes No No     638186581 absent 2 359 0.55 1.18 0.47
18 α Archaea Euryarchaeota Thermococci Thermococcales Thermococcaceae Thermococcus Thermococcus kodakaraensis KOD1 Tkod_Aa 638154520 69014 638207620 fig|69014.3.peg.1316   - No TK1445   cd04234   1 0 0   1 Yes No No     638207810 absent 5 358 1.39 1.29 1.08
19 α Archaea Crenarchaeota Thermoprotei Desulfurococcales Desulfurococcaceae Aeropyrum Aeropyrum pernix K1 Aper_Aa 638154501 272557 638188901 fig|272557.1.peg.846   - No APE1140   cd04244 cd04921 1 0 0   1 Yes No No     638188905 absent 6 455 1.31 1.3 1.01
19 α Archaea Euryarchaeota Methanopyri Methanopyrales Methanopyraceae Methanopyrus Methanopyrus kandleri AV19 Mkan_Aa 638154507 190192 638169593 fig|190192.1.peg.1531   - Yes MK1535   cd04243 cd04921 1 0 0   2 Yes No Yes     638169614 absent 4 429 0.93 1.24 0.75
20 α Archaea Crenarchaeota Thermoprotei Sulfolobales Sulfolobaceae Metallosphaera Metallosphaera sedula DSM 5348 Msed_Aa 640427120 399549 640507593 fig|399549.6.peg.1677   - No Msed_1699   cd04243 cd04921 0 0 1   1 Yes No No     640507891 absent 2 443 0.45 1.05 0.43
20 α Archaea Crenarchaeota Thermoprotei Sulfolobales Sulfolobaceae Sulfolobus Sulfolobus acidocaldarius DSM 639 Saci_Aa 638154517 330779 638198328 fig|330779.3.peg.331   - No Saci_1412   cd04243 cd04921/cd04892 0 0 1   1 Yes No No     638198547 absent 2 447 0.44 0.99 0.44
20 α Archaea Crenarchaeota Thermoprotei Sulfolobales Sulfolobaceae Sulfolobus Sulfolobus solfataricus P2 Ssol_Aa 638154518 273057 638162108 fig|273057.1.peg.796   - No SSO0876   cd04243 cd04921 0 0 1   1 Yes No No     638161878 absent 1 446 0.22 1.05 0.21
20 α Archaea Crenarchaeota Thermoprotei Sulfolobales Sulfolobaceae Sulfolobus Sulfolobus tokodaii 7 Stok_Aa 638154519 273063 638193573 fig|273063.1.peg.1341   - No ST1241   cd04243 cd04921/cd04892 0 0 1   1 Yes No No     638193904 absent 2 447 0.44 1.01 0.44
21 α Bacteria Proteobacteria Deltaproteobacteria Bdellovibrionales Bdellovibrionaceae Bdellovibrio Bdellovibrio bacteriovorus HD100 Bbac_Ab 637000030 264462 637480837 fig|264462.1.peg.121   - Yes Bd0134   cd04258 cd04932/cd04917 1 0 0   2 No No No       absent 3 460 0.65 1.2 0.54
21 α Bacteria Proteobacteria Gammaproteobacteria-lower Aeromonadales Aeromonadaceae Aeromonas Aeromonas hydrophila hydrophila ATCC 7966 Ahyd_Ab 639633004 380703 639715145 fig|380703.5.peg.2452   - Yes AHA_2570   cd04258 cd04932/cd04917 1 0 0   4 Yes Yes No       absent 3 450 0.66 1.47 0.45
21 α Bacteria Proteobacteria Gammaproteobacteria-lower Aeromonadales Aeromonadaceae Aeromonas Aeromonas salmonicida salmonicida A449 Asal_Ab 641522605 382245 640465501 fig|382245.6.peg.2406   - Yes ASA_2578   cd04258 cd04932/cd04917 1 0 0   4 Yes Yes No       absent 3 450 0.66 1.51 0.44
21 α Bacteria Proteobacteria Gammaproteobacteria-lower Alteromonadales Colwelliaceae Colwellia Colwellia psychrerythraea 34H Cpsy_Aa 637000081 167879 637284466 fig|167879.3.peg.1920   - Yes CPS_2004   cd04258 cd04932/cd04917 1 0 0   3 Yes Yes No       absent 1 456 0.21 1.12 0.19
21 α Bacteria Proteobacteria Gammaproteobacteria-lower Alteromonadales Idiomarinaceae Idiomarina Idiomarina loihiensis L2TR Iloi_Aa 637000136 283942 637605979 fig|283942.3.peg.1805   - Yes IL1439   cd04258 cd04932/cd04917 1 0 0   2 Yes No No       absent 2 446 0.44 1.36 0.32
21 α Bacteria Proteobacteria Gammaproteobacteria-lower Alteromonadales Pseudoalteromonadaceae Pseudoalteromona Pseudoalteromonas atlantica T6c Patl_Aa 637000216 342610 638056456 fig|342610.3.peg.2345   - Yes Patl_3425   cd04258 cd04932/cd04917 1 0 0   2 Yes Yes No       absent 2 452 0.44 1.24 0.35
21 α Bacteria Proteobacteria Gammaproteobacteria-lower Alteromonadales Pseudoalteromonadaceae Pseudoalteromona Pseudoalteromonas haloplanktis TAC125 Phal_Ab 637000217 326442 637734159 fig|326442.4.peg.1917   - Yes PSHAa1250   cd04258 cd04932/cd04917 1 0 0   4 Yes Yes No       absent 3 506 0.59 1.1 0.54
21 α Bacteria Proteobacteria Gammaproteobacteria-lower Alteromonadales Shewanellaceae Shewanella Shewanella amazonensis SB2B Sama_Ab 639633057 326297 639779938 fig|326297.7.peg.566   - Yes Sama_0603   cd04258 cd04932/cd04917 1 0 0   4 Yes Yes No       absent 2 452 0.44 1.27 0.35
21 α Bacteria Proteobacteria Gammaproteobacteria-lower Alteromonadales Shewanellaceae Shewanella Shewanella baltica OS155 Sbal_Ab 640069330 325240 640118007 fig|325240.9.peg.1016   fig|399599.3.peg.3919, Shewanella baltica OS195
fig|402882.10.peg.3952, Shewanella baltica OS185
 Yes Sbal_0788   cd04258 cd04932/cd04917 1 0 0   4 Yes Yes No       absent 2 451 0.44 1.25 0.35
21 α Bacteria Proteobacteria Gammaproteobacteria-lower Alteromonadales Shewanellaceae Shewanella Shewanella denitrificans OS217 Sden_Aa 637000256 318161 637957033 fig|318161.14.peg.2891   - Yes Sden_2982   cd04258 cd04932/cd04917 1 0 0   3 Yes Yes No       absent 2 449 0.44 1.19 0.37
21 α Bacteria Proteobacteria Gammaproteobacteria-lower Alteromonadales Shewanellaceae Shewanella Shewanella frigidimarina NCIMB 400 Sfri_Ab 637000257 318167 638133293 fig|318167.10.peg.510   - Yes Sfri_0535   cd04258 cd04932/cd04917 1 0 0   3 Yes Yes No       absent 2 459 0.43 1.18 0.36
21 α Bacteria Proteobacteria Gammaproteobacteria-lower Alteromonadales Shewanellaceae Shewanella Shewanella loihica PV-4 Sloi_Aa 640069331 323850 640162312 fig|323850.3.peg.1388   - Yes Shew_0779   cd04258 cd04932/cd04917 1 0 0   3 Yes Yes No       absent 2 452 0.44 1.21 0.36
21 α Bacteria Proteobacteria Gammaproteobacteria-lower Alteromonadales Shewanellaceae Shewanella Shewanella oneidensis MR-1 Sone_Ab 637000258 211586 637345738 fig|211586.1.peg.3619   - Yes SO3986   cd04258 cd04932/cd04917 1 0 0   4 Yes Yes No       absent 2 451 0.44 1.28 0.34
21 α Bacteria Proteobacteria Gammaproteobacteria-lower Alteromonadales Shewanellaceae Shewanella Shewanella putrefaciens CN-32 Sput_Ab 640427141 319224 640497805 fig|319224.13.peg.616   - Yes Sputcn32_0680   cd04258 cd04932/cd04917 1 0 0   4 Yes Yes No       absent 2 451 0.44 1.23 0.36
21 α Bacteria Proteobacteria Gammaproteobacteria-lower Alteromonadales Shewanellaceae Shewanella Shewanella sp. ANA-3 SHEW-3b 639633058 94122 639725187 fig|94122.5.peg.792   fig|60480.16.peg.625, Shewanella sp. MR-4
fig|60481.10.peg.3171, Shewanella sp. MR-7
fig|351745.7.peg.3231, Shewanella sp. W3-18-1
 Yes Shewana3_0652   cd04258 cd04932/cd04917 1 0 0   4 Yes Yes No       absent 2 451 0.44 1.25 0.35
21 α Bacteria Proteobacteria Gammaproteobacteria-lower Enterobacteriales Enterobacteriaceae Enterobacter Enterobacter sp. 638 ENTE-2a 640427113 399742 640490395 fig|399742.4.peg.310   - Yes Ent638_0229   cd04258 cd04932/cd04917 1 0 0   3 Yes Yes No       absent 2 449 0.44 1.52 0.29
21 α Bacteria Proteobacteria Gammaproteobacteria-lower Enterobacteriales Enterobacteriaceae Erwinia Erwinia carotovora atroseptica SCRI1043 Patr_Aa 637000102 218491 637380470 fig|218491.3.peg.2695   - Yes ECA3981   cd04258 cd04932/cd04917 1 0 0   3 Yes Yes No       absent 2 458 0.43 1.38 0.31
21 α Bacteria Proteobacteria Gammaproteobacteria-lower Enterobacteriales Enterobacteriaceae Escherichia Escherichia coli K12 Ecol_Aa 637000106 83333 637017348 fig|83333.1.peg.3933   fig|316407.3.peg.3861, Escherichia coli W3110
fig|344610.3.peg.1286, Escherichia coli 53638
fig|481805.3.peg.4309, Escherichia coli ATCC 8739
fig|83334.1.peg.4983, Escherichia coli O157:H7
fig|199310.1.peg.4885, Escherichia coli CFT073
fig|216592.1.peg.2314, Escherichia coli 042
fig|216593.1.peg.4005, Escherichia coli E2348/69
fig|405955.9.peg.3794, Escherichia coli APEC O1
fig|340197.3.peg.2023, Escherichia coli F11
fig|331111.3.peg.2172, Escherichia coli E24377A
fig|331112.3.peg.3975, Escherichia coli HS
fig|340184.3.peg.2540, Escherichia coli B7A
fig|340185.3.peg.1307, Escherichia coli E22
fig|340186.3.peg.943, Escherichia coli E110019
fig|344601.3.peg.992, Escherichia coli B171
 Yes b4024   cd04258 cd04932/cd04917 1 0 0 1ohi/2j0w/2j0x/ 3 Yes Yes No       absent 2 449 0.44 1.53 0.29
21 α Bacteria Proteobacteria Gammaproteobacteria-lower Enterobacteriales Enterobacteriaceae Photorhabdus Photorhabdus luminescens laumondii TTO1 Plum_Aa 637000207 243265 637466099 fig|243265.1.peg.4176   - Yes plu4380   cd04258 cd04932/cd04917 1 0 0   3 Yes Yes No       absent 2 459 0.43 1.35 0.32
21 α Bacteria Proteobacteria Gammaproteobacteria-lower Enterobacteriales Enterobacteriaceae Salmonella Salmonella enterica enterica sv Typhi Ty2 Sent_Na 637000253 209261 637407781 fig|209261.1.peg.3840   fig|220341.1.peg.3908, Salmonella enterica subsp. enterica serovar Typhi str. CT18
fig|295319.3.peg.4005, Salmonella enterica subsp. enterica serovar Paratypi A str. ATCC 9150
fig|594.1.peg.585, Salmonella enterica subsp. enterica serovar Gallinarum
 Yes t4126   cd04258 cd04932/cd04917 1 0 0   3 Yes Yes No       absent 2 449 0.44 1.53 0.29
21 α Bacteria Proteobacteria Gammaproteobacteria-lower Enterobacteriales Enterobacteriaceae Salmonella Salmonella typhimurium LT2 Styp_Aa 637000255 99287 637214913 fig|99287.1.peg.4058   - Yes STM4220   cd04258 cd04932/cd04917 1 0 0   3 Yes Yes No       absent 2 449 0.44 1.52 0.29
21 α Bacteria Proteobacteria Gammaproteobacteria-lower Enterobacteriales Enterobacteriaceae Shigella Shigella boydii Sb227 Sboy_Aa 637000261 300268 637809672 - fig|344609.3.peg.799, Shigella boydii BS512
 No SBO_4052   cd04258 cd04932/cd04917 1 0 0   2 Yes Yes No       absent 2 449 0.44 1.59 0.28
21 α Bacteria Proteobacteria Gammaproteobacteria-lower Enterobacteriales Enterobacteriaceae Shigella Shigella dysenteriae Sd197 Sdys_Aa 640427142 300267 640436423 - fig|216598.1.peg.1703, Shigella dysenteriae M131649
 Yes SDY_4227   cd04258 cd04932/cd04917 1 0 0   3 Yes Yes No       absent 2 449 0.44 1.6 0.28
21 α Bacteria Proteobacteria Gammaproteobacteria-lower Enterobacteriales Enterobacteriaceae Shigella Shigella flexneri 2a 2457T Sfle_Aa 637000263 198215 637425313 fig|198215.1.peg.3044   fig|198214.1.peg.3935, Shigella flexneri 2a str. 301
 Yes S3550   cd04258 cd04932/cd04917 1 0 0   3 Yes Yes No       absent 2 449 0.44 1.54 0.29
21 α Bacteria Proteobacteria Gammaproteobacteria-lower Enterobacteriales Enterobacteriaceae Shigella Shigella sonnei Ss046 Sson_Aa 640427143 300269 640431867 fig|300269.3.peg.3287   fig|216599.1.peg.3470, Shigella sonnei 53G
 Yes SSON_4202   cd04258 cd04932/cd04917 1 0 0   3 Yes Yes No       absent 2 449 0.44 1.58 0.28
21 α Bacteria Proteobacteria Gammaproteobacteria-lower Enterobacteriales Enterobacteriaceae Sodalis Sodalis glossinidius morsitans Sglo_Aa 637000270 343509 637854125 fig|343509.6.peg.4727   - Yes SG2147   cd04258 cd04932/cd04917 1 0 0   2 Yes Yes No       absent 2 454 0.44 1.33 0.33
21 α Bacteria Proteobacteria Gammaproteobacteria-lower Enterobacteriales Enterobacteriaceae Yersinia Yersinia pestis CO92 Ypes_Aa 637000351 214092 637202683 fig|214092.1.peg.3686   fig|187410.1.peg.21, Yersinia pestis KIM
fig|229193.1.peg.2971, Yersinia pestis biovar Medievalis str. 91001
fig|349746.3.peg.3272, Yersinia pestis Angola
fig|360102.4.peg.249, Yersinia pestis Antiqua
fig|377628.5.peg.159, Yersinia pestis Nepal516
fig|386656.4.peg.359, Yersinia pestis Pestoides F
 Yes YPO3719   cd04258 cd04932/cd04917 1 0 0   3 Yes Yes No       absent 2 461 0.43 1.36 0.32
21 α Bacteria Proteobacteria Gammaproteobacteria-lower Enterobacteriales Enterobacteriaceae Yersinia Yersinia pseudotuberculosis IP 32953 Ypse_Aa 637000355 273123 637535257 fig|273123.1.peg.3714   fig|349747.3.peg.2241, Yersinia pseudotuberculosis IP 31758
fig|502800.3.peg.363, Yersinia pseudotuberculosis YPIII
 Yes YPTB3650   cd04258 cd04932/cd04917 1 0 0   3 Yes Yes No       absent 2 461 0.43 1.35 0.32
21 α Bacteria Proteobacteria Gammaproteobacteria-lower Pasteurellales Pasteurellaceae Haemophilus Haemophilus ducreyi 35000HP Hduc_Aa 637000124 233412 637129370 fig|233412.1.peg.1164   - Yes HD1375   cd04258 cd04932/cd04917 1 0 0   1 No No No       absent 3 451 0.66 1.1 0.6
21 α Bacteria Proteobacteria Gammaproteobacteria-lower Pasteurellales Pasteurellaceae Mannheimia Mannheimia succiniciproducens MBEL55E Msuc_Aa 637000156 221988 637551140 fig|221988.1.peg.1517   - Yes MS1613   cd04258 cd04932/cd04917 1 0 0   2 Yes Yes No       absent 3 450 0.66 1.14 0.58
21 α Bacteria Proteobacteria Gammaproteobacteria-lower Pasteurellales Pasteurellaceae Pasteurella Pasteurella multocida multocida Pm70 Pmul_Aa 637000203 272843 637070551 fig|272843.1.peg.937   - Yes PM0937   cd04258 cd04932/cd04917 1 0 0   2 Yes Yes No       absent 3 450 0.66 1.17 0.56
21 α Bacteria Proteobacteria Gammaproteobacteria-lower Pasteurellales Pasteurellaceae Actinobacillus Actinobacillus pleuropneumoniae L20 Aple_Aa 640069302 416269 640122376 fig|416269.5.peg.680   fig|228399.1.peg.1687, Actinobacillus pleuropneumoniae serovar 1 str. 4074
 Yes APL_0710   cd04258 cd04932/cd04917 1 0 0   2 Yes Yes No       absent 3 450 0.66 1.14 0.58
21 α Bacteria Proteobacteria Gammaproteobacteria-upper Thiotrichales Francisellaceae Francisella Francisella tularensis novicida U112 Ftul_Aa 639633024 401614 639753766 fig|401614.5.peg.1694   - Yes FTN_1730   cd04258 cd04932/cd04917 1 0 0   2 Yes No No       absent 0 451 0 0.91 0
21 α Bacteria Proteobacteria Gammaproteobacteria-lower Vibrionales Vibrionaceae Photobacterium Photobacterium profundum SS9 Ppro_Bc 637000206 298386 637587992 fig|298386.1.peg.5506   fig|314280.3.peg.3571, Photobacterium profundum 3TCK
 Yes PBPRA3293   cd04258 cd04932/cd04917 1 0 0   5 Yes Yes No       absent 2 459 0.43 1.28 0.34
21 α Bacteria Proteobacteria Gammaproteobacteria-lower Vibrionales Vibrionaceae Vibrio Vibrio cholerae O1 biovar eltor str. N16961 Vcho_Fb 637000333 243277 637046846 fig|243277.1.peg.386   fig|345072.3.peg.2981, Vibrio cholerae MO10
fig|345073.6.peg.3259, Vibrio cholerae O395
fig|345076.3.peg.2349, Vibrio cholerae V52
fig|412614.3.peg.1693, Vibrio cholerae 2740-80
fig|412967.3.peg.2101, Vibrio cholerae MAK 757
fig|417399.3.peg.1317, Vibrio cholerae NCTC8457
fig|417400.3.peg.1340, Vibrio cholerae B33
fig|412966.3.peg.2123, Vibrio cholerae 1587
fig|404974.3.peg.2203, Vibrio cholerae AM-19226
fig|412883.3.peg.1773, Vibrio cholerae MZO-3
fig|88888881.3.peg.2362, Vibrio cholerae NRT36s
 Yes VC0391   cd04258 cd04932/cd04917 1 0 0   5 Yes Yes No       absent 3 479 0.62 1.32 0.47
21 α Bacteria Proteobacteria Gammaproteobacteria-lower Vibrionales Vibrionaceae Vibrio Vibrio fischeri ES114 Vfis_Ab 637000334 312309 637634971 fig|312309.3.peg.338   fig|388396.7.peg.665, Vibrio fischeri MJ11
 Yes VF0338   cd04258 cd04932/cd04917 1 0 0   5 Yes Yes No       absent 2 450 0.44 1.18 0.37
21 α Bacteria Proteobacteria Gammaproteobacteria-lower Vibrionales Vibrionaceae Vibrio Vibrio parahaemolyticus RIMD 2210633 Vpar_Ab 637000335 223926 637399733 fig|223926.1.peg.4936   fig|223926.1.peg.2716, Vibrio parahaemolyticus RIMD 2210633
 Yes VP2715   cd04258 cd04932/cd04917 1 0 0   5 Yes Yes No       absent 2 450 0.44 1.23 0.36
21 α Bacteria Proteobacteria Gammaproteobacteria-lower Vibrionales Vibrionaceae Vibrio Vibrio vulnificus CMCP6 Vvul_Ac 637000336 216895 637361784 fig|216895.1.peg.1301   fig|196600.1.peg.3026, Vibrio vulnificus YJ016
 Yes VV11424   cd04258 cd04932/cd04917 1 0 0   4 Yes Yes No       absent 2 449 0.44 1.27 0.35
22 α Bacteria Chlamydiae Chlamydiae Chlamydiales Chlamydiaceae Chlamydia Chlamydia muridarum Nigg Cmur_Aa 637000062 243161 637061448 fig|243161.4.peg.689   - No TC0641   cd04243   1 0 0   1 No No No       absent 6 437 1.37 0.97 1.41
22 α Bacteria Chlamydiae Chlamydiae Chlamydiales Chlamydiaceae Chlamydia Chlamydia trachomatis D/UW-3/CX Ctra_Aa 637000064 272561 637004718 fig|272561.1.peg.369   fig|315277.3.peg.275, Chlamydia trachomatis A/HAR-13
 No CT362   cd04243   1 0 0   1 No No No       absent 8 431 1.85 0.95 1.95
22 α Bacteria Chlamydiae Chlamydiae Chlamydiales Chlamydiaceae Chlamydophila Chlamydophila abortus S26/3 Cabo_Aa 637000065 218497 637382531 fig|218497.4.peg.644   - No CAB678   cd04243   1 0 0   1 No No No       absent 5 440 1.13 0.96 1.18
22 α Bacteria Chlamydiae Chlamydiae Chlamydiales Chlamydiaceae Chlamydophila Chlamydophila caviae GPIC Ccav_Aa 637000066 227941 637251003 fig|227941.1.peg.702   - No CCA00713   cd04243   1 0 0   1 No No No       absent 5 440 1.13 0.95 1.19
22 α Bacteria Chlamydiae Chlamydiae Chlamydiales Chlamydiaceae Chlamydophila Chlamydophila felis Fe/C-56 Cfel_Aa 637000067 264202 637908716 fig|264202.3.peg.303   - No CF0305   cd04243   1 0 0   1 No No No       absent 3 440 0.68 0.95 0.72
22 α Bacteria Chlamydiae Chlamydiae Chlamydiales Chlamydiaceae Chlamydophila Chlamydophila pneumoniae CWL029 Cpne_Aa 637000069 115713 637024573 fig|115713.1.peg.1030   fig|138677.1.peg.1045, Chlamydophila pneumoniae J138
fig|182082.1.peg.1086, Chlamydophila pneumoniae TW-183
fig|115711.7.peg.774, Chlamydophila pneumoniae AR39
 No CPn1049   cd04243   1 0 0   1 No No No       absent 4 440 0.9 1.01 0.89
23 α Archaea Euryarchaeota Halobacteria Halobacteriales Halobacteriaceae Haloarcula Haloarcula marismortui ATCC 43049 Hmar_Aa 638154503 272569 638184246 fig|272569.1.peg.2429   - No rrnAC2663   cd04234   1 0 0   1 Yes No No     638184014 absent 2 391 0.51 1.14 0.45
23 α Archaea Euryarchaeota Halobacteria Halobacteriales Halobacteriaceae Halobacterium Halobacterium sp. NRC-1 HALO-10a 638154504 64091 638160967 fig|64091.1.peg.2017   - No VNG2374G   cd04234 cd04868/cd04921 1 0 0   1 Yes No No     638161197 absent 2 394 0.5 1.1 0.45
23 α Archaea Euryarchaeota Halobacteria Halobacteriales Halobacteriaceae Haloquadratum Haloquadratum walsbyi DSM 16790 Hwal_Aa 637000129 362976 638050303 fig|362976.6.peg.5   - No HQ1005A   cd04234 cd04919/cd04923 1 0 0   1 Yes No No     638052631 absent 2 392 0.51 1.01 0.5
23 α Archaea Euryarchaeota Halobacteria Halobacteriales Halobacteriaceae Natronomonas Natronomonas pharaonis DSM 2160 Npha_Aa 637000187 348780 637720811 fig|348780.3.peg.329   - No NP0550A   cd04234   1 0 0   1 Yes No No     637720680 absent 2 394 0.5 1.05 0.48
23 α Archaea Euryarchaeota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibact Methanobrevibacter smithii ATCC 35061 Msmi_Aa 640427121 420247 640592631 fig|420247.6.peg.811   - No Msm_0832   cd04234 cd04892/cd04921 1 0 0   1 Yes No Yes     640591937 absent 3 406 0.73 0.65 1.12
23 α Archaea Euryarchaeota Methanobacteria Methanobacteriales Methanobacteriaceae Methanosphaera Methanosphaera stadtmanae DSM 3091 Msta_Aa 637000163 339860 637845997 fig|339860.6.peg.105   - No Msp_0107   cd04234 cd04916/cd04872 1 0 0   1 Yes No Yes     637846377 absent 2 408 0.49 0.55 0.89
23 α Archaea Euryarchaeota Methanobacteria Methanobacteriales Methanobacteriaceae Methanothermobac Methanothermobacter thermautotrophicus str. Delta H Mthe-5_Aa 638154510 187420 638155329 fig|187420.1.peg.796   - No MTH802   cd04234 cd04892/cd04921 1 0 0   1 Yes No Yes 638155768   638154931 absent
24 β Bacteria Firmicutes Bacilli Bacillales Bacillaceae Bacillus Bacillus anthracis Ames Bant_Ab 637000014 198094 637304152 fig|198094.1.peg.3608   fig|205919.3.peg.208, Bacillus anthracis str. Kruger B
fig|260799.1.peg.3611, Bacillus anthracis str. Sterne
fig|261591.3.peg.5091, Bacillus anthracis str. Vollum
fig|261594.1.peg.3914, Bacillus anthracis str. 'Ames Ancestor'
fig|280354.3.peg.1267, Bacillus anthracis str. CNEVA-9066
fig|280355.3.peg.1165, Bacillus anthracis str. A1055
fig|280477.3.peg.2625, Bacillus anthracis str. Australia 94
 No BA3936   cd04260 cd04914/cd04937 1 0 0   2 Yes Yes No 637302346/637305803   637302942 absent 1 410 0.24 1.03 0.23
24 β Bacteria Firmicutes Bacilli Bacillales Bacillaceae Bacillus Bacillus cereus ATCC 10987 Bcer_Ab 637000016 222523 637280638 fig|222523.1.peg.3806   fig|226900.1.peg.3632, Bacillus cereus ATCC 14579
fig|288681.3.peg.1667, Bacillus cereus ZK
fig|315749.4.peg.2517, Bacillus cereus subsp. cytotoxis NVH 391-98
fig|269801.1.peg.4532, Bacillus cereus G9241
 No BCE_3837   cd04260 cd04914/cd04937 1 0 0   2 Yes Yes No 637278870/637282357   637279436 absent 1 410 0.24 1.02 0.24
24 β Bacteria Firmicutes Bacilli Bacillales Bacillaceae Bacillus Bacillus clausii KSM-K16 Bcla_Aa 637000019 66692 637620571 fig|66692.3.peg.2519   - No ABC2215   cd04260 cd04914/cd04937 1 0 0   2 Yes Yes No 637621311 637619929 637618323 absent 2 405 0.49 1.09 0.45
24 β Bacteria Firmicutes Bacilli Bacillales Bacillaceae Bacillus Bacillus halodurans C-125 Bhal-1_Ab 637000020 272558 637059102 fig|272558.1.peg.2400   - No BH2400   cd04260 cd04914/cd04937 1 0 0   3 Yes Yes No 637060139 637057951 637058439 absent 2 411 0.48 1.13 0.42
24 β Bacteria Firmicutes Bacilli Bacillales Bacillaceae Bacillus Bacillus licheniformis ATCC 14580 (Goettingen) Blic_Aa 639279303 279010 639311067 fig|279010.5.peg.2605   - No BLi01901   cd04260 cd04914/cd04937 1 0 0   3 Yes Yes No 639312540     absent 1 404 0.24 1.02 0.24
24 β Bacteria Firmicutes Bacilli Bacillales Bacillaceae Bacillus Bacillus subtilis 168 Bsub_Ab 637000022 224308 637031834 fig|224308.1.peg.1679   - No BSU16760   cd04260 cd04914/cd04937 1 0 0   3 Yes Yes No 637033411     absent 1 404 0.24 1.03 0.23
24 β Bacteria Firmicutes Bacilli Bacillales Bacillaceae Bacillus Bacillus thuringiensis sv konkukian 97-27 Bthu_Ab 637000023 281309 637514959 fig|281309.3.peg.3759   fig|412694.5.peg.3292, Bacillus thuringiensis str. Al Hakam
 No BT9727_3541   cd04260 cd04914/cd04937 1 0 0   2 Yes Yes No 637513229/637516521   637513812 absent 1 410 0.24 1 0.24
24 β Bacteria Firmicutes Bacilli Bacillales Bacillaceae Geobacillus Geobacillus kaustophilus HTA426 Gkau_Aa 637000118 235909 637598051 fig|235909.3.peg.125   - No GK1276   cd04260 cd04914/cd04937 1 0 0   2 Yes Yes No 637599776     absent 3 417 0.71 1.29 0.55
24 β Bacteria Firmicutes Bacilli Bacillales Bacillaceae Geobacillus Geobacillus thermodenitrificans NG80-2 Gthe_Aa 640069312 420246 640191970 fig|420246.5.peg.1098   - No GTNG_1130   cd04260 cd04914/cd04937 1 0 0   1 Yes Yes No 640193765   640193105 absent 3 415 0.72 1.26 0.57
24 β Bacteria Firmicutes Bacilli Bacillales Bacillaceae Oceanobacillus Oceanobacillus iheyensis HTE831 Oihe_Aa 637000201 221109 637325259 fig|221109.1.peg.1613   - No OB1611   cd04260 cd04914/cd04937 1 0 0   2 Yes No No 637324081     absent 1 411 0.24 1.01 0.24
24 β Bacteria Firmicutes Bacilli Bacillales Listeriaceae Listeria Listeria innocua Clip11262 Linn_Aa 637000152 272626 637224202 fig|272626.1.peg.1464   - No lin1475   cd04260 cd04914/cd04937 1 0 0   3 Yes Yes No 637225465     absent 1 403 0.24 0.94 0.26
24 β Bacteria Firmicutes Bacilli Bacillales Listeriaceae Listeria Listeria monocytogenes 4b F2365 Lmon_Aa 637000154 265669 637165210 fig|265669.1.peg.1440   fig|393117.3.peg.1335, Listeria monocytogenes FSL J1-194
fig|169963.1.peg.1428, Listeria monocytogenes EGD-e
fig|267409.1.peg.737, Listeria monocytogenes str. 1/2a F6854
fig|267410.1.peg.1318, Listeria monocytogenes str. 4b H7858
fig|393123.3.peg.1107, Listeria monocytogenes FSL N1-017
fig|393124.3.peg.1068, Listeria monocytogenes FSL N3-165
fig|393125.3.peg.1764, Listeria monocytogenes FSL R2-503
fig|393128.3.peg.1233, Listeria monocytogenes F6900
fig|393130.3.peg.1179, Listeria monocytogenes J0161
fig|393131.3.peg.1189, Listeria monocytogenes J2818
fig|393133.3.peg.1363, Listeria monocytogenes 10403S
fig|401650.3.peg.1036, Listeria monocytogenes Aureli 1997
 No LMOf2365_1455   cd04260 cd04914/cd04937 1 0 0   3 Yes Yes No 637166319     absent 1 403 0.24 0.92 0.26
24 β Bacteria Firmicutes Bacilli Bacillales Listeriaceae Listeria Listeria welshimeri sv 6b SLCC5334 Lwel_Aa 639633035 386043 639706342 fig|386043.6.peg.1408   - No lwe1453   cd04260 cd04914/cd04937 1 0 0   3 Yes Yes No 639707439     absent 1 403 0.24 0.92 0.26
24 β Bacteria Firmicutes Bacilli Lactobacillales Lactobacillaceae Lactobacillus Lactobacillus plantarum WCFS1 Lpla_Aa 637000141 220668 637388264 fig|220668.1.peg.822   - No lp_0979   cd04260 cd04914/cd04937 1 0 0   2 Yes No No 637387915 637389605   absent 1 400 0.25 1.17 0.21
24 β Bacteria Firmicutes Bacilli Lactobacillales Lactobacillaceae Lactobacillus Lactobacillus salivarius salivarius UCC118 Lsal_Aa 637000143 362948 637929164 - - No LSL_1058   cd04260 cd04914/cd04937 1 0 0   1 Yes No No 637929636     absent 2 398 0.5 0.96 0.52
24 β Bacteria Firmicutes Clostridia Clostridiales unclassified Symbiobacterium Symbiobacterium thermophilum IAM 14863 Sthe-17_Aa 637000306 292459 637538069 fig|292459.1.peg.1489   - No STH1548   cd04260 cd04914/cd04937 1 0 0   2 Yes No No 637539275     absent 3 406 0.73 1.45 0.5
24 β Bacteria Firmicutes Clostridia Clostridiales Clostridiaceae Clostridium Clostridium acetobutylicum ATCC 824 Cace_Aa 637000076 272562 637177472 fig|272562.1.peg.1964   - No CAC1810   cd04260 cd04914/cd04937 1 0 0   2 Yes No No 637176669     absent 1 399 0.25 0.74 0.34
24 β Bacteria Firmicutes Clostridia Clostridiales Clostridiaceae Clostridium Clostridium botulinum A ATCC 3502 Cbot_Bb 640427109 413999 640574001 fig|413999.4.peg.2295   fig|441770.4.peg.2117, Clostridium botulinum A str. ATCC 19397
fig|441771.4.peg.2099, Clostridium botulinum A str. Hall
 No CBO2410   cd04260 cd04914/cd04937 1 0 0   3 Yes No No 640573238 640573473   absent 1 401 0.24 0.68 0.35
24 β Bacteria Firmicutes Clostridia Clostridiales Clostridiaceae Clostridium Clostridium difficile 630 Cdif_Ab 640069308 272563 640157120 fig|1496.1.peg.3410   - No CD1322   cd04260 cd04914/cd04937 1 0 0   2 Yes No No   640156958/640157389   absent 0 407 0 0.62 0
24 β Bacteria Firmicutes Clostridia Clostridiales Clostridiaceae Clostridium Clostridium novyi NT Cnov_Aa 639633021 386415 639732223 - - No NT01CX_2128   cd04260 cd04914/cd04937 1 0 0   2 Yes No No 639730992     absent 1 401 0.24 0.6 0.4
24 β Bacteria Firmicutes Clostridia Clostridiales Clostridiaceae Clostridium Clostridium perfringens 13 Cper_Aa 637000079 195102 637253034 fig|195102.1.peg.1741   - No CPE1678   cd04260 cd04914/cd04937 1 0 0   1 No No No       absent 1 398 0.25 0.69 0.36
24 β Bacteria Firmicutes Clostridia Clostridiales Clostridiaceae Clostridium Clostridium tetani E88 Ctet_Aa 637000080 212717 637386099 fig|212717.1.peg.1134   - No CTC01282   cd04260 cd04914/cd04937 1 0 0   2 Yes No No 637387084   637385729 absent 1 401 0.24 0.64 0.38
24 β Bacteria Firmicutes Clostridia Clostridiales Peptococcaceae Carboxydothermus Carboxydothermus hydrogenoformans Z-2901 Chyd_Ab 637000060 246194 637753902 fig|246194.3.peg.1206   - No CHY_1155   cd04260 cd04914/cd04937 1 0 0   2 Yes No No 637754652     absent 1 410 0.24 0.85 0.28
24 β Bacteria Firmicutes Clostridia Clostridiales Peptococcaceae Desulfotomaculum Desulfotomaculum reducens MI-1 Dred_Aa 640069310 349161 640181108 fig|349161.4.peg.1907   - No Dred_1940   cd04260 cd04914/cd04937 1 0 0   2 Yes No No 640180334     absent 1 408 0.24 0.94 0.26
24 β Bacteria Firmicutes Clostridia Clostridiales Peptococcaceae Pelotomaculum Pelotomaculum thermopropionicum SI Pthe_Ab 640427128 370438 640527253 - - No PTH_1287   cd04260 cd04914/cd04937 1 0 0   2 Yes No No 640527573     absent 3 414 0.72 0.98 0.73
24 β Bacteria Firmicutes Clostridia Thermoanaerobacter Thermoanaerobacteriace Moorella Moorella thermoacetica ATCC 39073 Mthe-3_Ab 637000167 264732 637828995 fig|264732.9.peg.1050   - No Moth_1067   cd04260 cd04914/cd04937 1 0 0   2 Yes No No 637829243     absent 2 413 0.48 1.13 0.42
24 β Bacteria Firmicutes Clostridia Thermoanaerobacter Thermoanaerobacteriace Thermoanaerobact Thermoanaerobacter tengcongensis MB4 Tten_Aa 637000318 273068 637262918 fig|273068.3.peg.1347   - No TTE1382   cd04260 cd04914/cd04937 1 0 0   1 Yes No No 637264088 637263645   absent 0 398 0 0.8 0
25 β Bacteria Actinobacteria Actinobacteridae Actinomycetales Acidothermaceae Acidothermus Acidothermus cellulolyticus 11B Acel_Aa 639633001 351607 639730806 fig|351607.5.peg.2008   - No Acel_2012   cd04261 cd04913/cd04936 0 1 0   1 Yes No No 639729398     MEA 1 422 0.23 1.38 0.17
25 β Bacteria Actinobacteria Actinobacteridae Actinomycetales Micrococcaceae Arthrobacter Arthrobacter sp. FB24 ARTH-1a 639633006 290399 639688349 - - No Arth_0552   cd04261 cd04913/cd04936 1 0 0   1 Yes No No 639690442   639691384 LEQ 1 452 0.22 1.45 0.15
25 β Bacteria Actinobacteria Actinobacteridae Actinomycetales Corynebacteriaceae Corynebacterium Corynebacterium diphtheriae NCTC 13129 Cdip_Aa 637000082 257309 637117498 fig|257309.1.peg.256   - No DIP0277   cd04261 cd04913/cd04936 0 1 0   1 Yes Yes No 637118245     VEE 1 421 0.23 1.4 0.16
25 β Bacteria Actinobacteria Actinobacteridae Actinomycetales Corynebacteriaceae Corynebacterium Corynebacterium efficiens YS-314 Ceff_Aa 637000083 196164 637351074 fig|196164.1.peg.220   - No CE0220   cd04261 cd04913/cd04936 0 1 0   1 Yes Yes No 637352158     MEE 1 428 0.23 1.45 0.16
25 β Bacteria Actinobacteria Actinobacteridae Actinomycetales Corynebacteriaceae Corynebacterium Corynebacterium glutamicum ATCC 13032 (Kitasato) Cglu_Aa 639279307 196627 639301219 fig|196627.4.peg.286   - No NCgl0247   cd04261 cd04913/cd04936 0 1 0 2dtj 1 Yes Yes No 639315697/639302125     VEE 1 421 0.23 1.4 0.16
25 β Bacteria Actinobacteria Actinobacteridae Actinomycetales Corynebacteriaceae Corynebacterium Corynebacterium jeikeium K411 Cjei_Aa 637000085 306537 637665819 fig|306537.3.peg.766   - No jk1998   cd04261 cd04913/cd04936 0 1 0   1 Yes Yes No 637665163     MEE 1 421 0.23 1.41 0.16
25 β Bacteria Actinobacteria Actinobacteridae Actinomycetales Microbacteriaceae Clavibacter Clavibacter michiganensis michiganensis NCPPB 382 Cmic_Aa 640427108 443906 640540204 fig|443906.9.peg.952   - No CMM_0902   cd04261 cd04913/cd04936 1 0 0   1 Yes No No 640540464     VEE 0 421 0 1.38 0
25 β Bacteria Actinobacteria Actinobacteridae Actinomycetales Frankiaceae Frankia Frankia alni ACN14a Faln_Ab 637000115 326424 638097357 - - No FRAAL0605   cd04261 cd04913/cd04936 1 0 0   2 Yes No No 638102598     VEQ 1 422 0.23 1.41 0.16
25 β Bacteria Actinobacteria Actinobacteridae Actinomycetales Frankiaceae Frankia Frankia sp. CcI3 FRAN-2b 637000116 106370 637877590 fig|106370.11.peg.255   fig|298653.4.peg.6441, Frankia sp. EAN1pec
 No Francci3_0262   cd04261 cd04913/cd04936 1 0 0   2 Yes No No 637881051     VEQ 1 422 0.23 1.44 0.16
25 β Bacteria Actinobacteria Actinobacteridae Actinomycetales Microbacteriaceae Leifsonia Leifsonia xyli xyli CTCB07 Lxyl_Aa 637000149 281090 637525335 fig|281090.3.peg.1388   - No Lxx03450   cd04261 cd04913/cd04936 1 0 0   1 Yes No No 637525599     VEE 0 428 0 1.34 0
25 β Bacteria Actinobacteria Actinobacteridae Actinomycetales Corynebacteriaceae Mycobacterium Mycobacterium avium paratuberculosis K-10 Mavi_Ba 637000168 262316 637133255 fig|262316.1.peg.311   - No MAP0311c   cd04261 cd04913/cd04936 0 1 0   1 Yes Yes No 637135439     MED 0 421 0 1.48 0
25 β Bacteria Actinobacteria Actinobacteridae Actinomycetales Corynebacteriaceae Mycobacterium Mycobacterium bovis AF2122/97 Mbov_Aa 637000169 233413 637141082 fig|233413.1.peg.3704   fig|410289.13.peg.3731, Mycobacterium bovis BCG str. Pasteur 1173P2
 No Mb3736c   cd04261 cd04913/cd04936 0 1 0   1 Yes Yes No 637138663     MED 0 421 0 1.46 0
25 β Bacteria Actinobacteria Actinobacteridae Actinomycetales Mycobacteriaceae Mycobacterium Mycobacterium gilvum PYR-GCK Mgil_Aa 640427122 350054 640455506 - - No Mflv_1304   cd04261 cd04913/cd04936 0 1 0   1 Yes Yes No 640456508     MED 0 440 0 1.52 0
25 β Bacteria Actinobacteria Actinobacteridae Actinomycetales Corynebacteriaceae Mycobacterium Mycobacterium leprae TN Mlep_Aa 637000170 272631 637073099 fig|272631.1.peg.1383   - No ML2323   cd04261 cd04913/cd04936 0 1 0   1 Yes Yes No 637072381     MED 0 421 0 1.38 0
25 β Bacteria Actinobacteria Actinobacteridae Actinomycetales Corynebacteriaceae Mycobacterium Mycobacterium smegmatis MC2 155 Msme_Aa 639633041 246196 639744668 fig|246196.1.peg.6218   - No MSMEG_6257   cd04261 cd04913/cd04936 0 1 0   1 Yes Yes No 639743389     MED 0 421 0 1.47 0
25 β Bacteria Actinobacteria Actinobacteridae Actinomycetales Corynebacteriaceae Mycobacterium Mycobacterium tuberculosis CDC1551 Mtub_Aa 637000172 83331 637098263 fig|83331.1.peg.3957   fig|336982.3.peg.3929, Mycobacterium tuberculosis F11
fig|419947.3.peg.3736, Mycobacterium tuberculosis H37Ra
fig|83332.1.peg.3712, Mycobacterium tuberculosis H37Rv
 No MT3812   cd04261 cd04913/cd04936 0 1 0   1 Yes Yes No 637095655     MED 0 421 0 1.48 0
25 β Bacteria Actinobacteria Actinobacteridae Actinomycetales Mycobacteriaceae Mycobacterium Mycobacterium ulcerans Agy99 Mulc_Aa 639633043 362242 639762273 - - No MUL_4297   cd04261 cd04913/cd04936 0 1 0   1 Yes Yes No 639761992     MED 0 421 0 1.47 0
25 β Bacteria Actinobacteria Actinobacteridae Actinomycetales Mycobacteriaceae Mycobacterium Mycobacterium vanbaalenii PYR-1 Mvan_Aa 639633044 350058 639808976 fig|350058.5.peg.5419   - No Mvan_5504   cd04261 cd04913/cd04936 0 1 0   1 Yes Yes No 639807819     MED 0 421 0 1.5 0
25 β Bacteria Actinobacteria Actinobacteridae Actinomycetales Mycobacteriaceae Mycobacterium Mycobacterium sp. JLS MYCO-4a 640069320 164757 640142568 fig|164757.7.peg.5207   fig|164756.6.peg.4659, Mycobacterium sp. MCS
 No Mjls_5257   cd04261 cd04913/cd04936 0 1 0   1 Yes Yes No 640141194     MED 0 421 0 1.51 0
25 β Bacteria Actinobacteria Actinobacteridae Actinomycetales Corynebacteriaceae Nocardia Nocardia farcinica IFM 10152 Nfar_Aa 637000198 247156 637572834 fig|247156.1.peg.389   - No nfa3180   cd04261 cd04913/cd04936 0 1 0   1 Yes Yes No 637573580     LEK 0 421 0 1.46 0
25 β Bacteria Actinobacteria Actinobacteridae Actinomycetales Nocardioidaceae Nocardioides Nocardioides sp. JS614 NOCA-3a 639633046 196162 639774935 fig|196162.6.peg.546   - No Noca_0321   cd04261 cd04913/cd04936 0 1 0   1 Yes No No 639776344     MEQ 1 424 0.23 1.52 0.15
25 β Bacteria Actinobacteria Actinobacteridae Actinomycetales Propionibacteriaceae Propionibacteriu Propionibacterium acnes KPA171202 Pacn_Aa 637000215 267747 637522885 fig|267747.1.peg.2090   - No PPA2148   cd04261 cd04913/cd04936 1 0 0   1 Yes No No 637522007     MEE 1 424 0.23 1.63 0.14
25 β Bacteria Actinobacteria Actinobacteridae Actinomycetales Corynebacteriaceae Rhodococcus Rhodococcus sp. RHA1 RHOD-5a 637000234 101510 638090873 - - No RHA1_ro04291   cd04261 cd04913/cd04936 0 1 0   1 Yes Yes No 638088075     VEE 0 421 0 1.44 0
25 β Bacteria Actinobacteria Actinobacteridae Actinomycetales Streptomycetaceae Streptomyces Streptomyces avermitilis MA-4680 Save_Aa 637000304 227882 637207698 fig|227882.1.peg.4562   - No SAV4559   cd04261 cd04913/cd04936 0 1 0   1 Yes No No 637206027     VEQ 2 430 0.46 1.54 0.3
25 β Bacteria Actinobacteria Actinobacteridae Actinomycetales Streptomycetaceae Streptomyces Streptomyces coelicolor A3(2) Scoe_Aa 637000305 100226 637267867 fig|100226.1.peg.3572   - No SCO3615   cd04261 cd04913/cd04936 0 1 0   1 Yes No No 637269630   637264648 VEQ 2 425 0.47 1.52 0.31
25 β Bacteria Actinobacteria Actinobacteridae Actinomycetales Pseudonocardiaceae Saccharopolyspor Saccharopolyspora erythraea NRRL 2338 Sery_Aa 640069329 405948 640171032 - - No SACE_0282   cd04261 cd04913/cd04936 0 1 0   1 Yes Yes No 640176912   640172972 VEQ 0 421 0 1.52 0
25 β Bacteria Actinobacteria Actinobacteridae Actinomycetales Streptomycetaceae Streptomyces Streptomyces griseus subsp. griseus NBRC 13350 Sgri_Aa 641522653 455632 641697696 - - No SGR_3372   cd04261 cd04913/cd04936 0 1 0   2 Yes No No 641696496     VEH 2 423 0.47 1.46 0.32
25 β Bacteria Actinobacteria Actinobacteridae Actinomycetales Micromonosporaceae Salinispora Salinispora tropica CNB-440 Stro_Aa 640427140 369723 640472498 fig|369723.3.peg.226   - No Strop_0226   cd04261 cd04913/cd04936 0 1 0   1 Yes No No 640475906     VEQ 1 421 0.23 1.55 0.15
25 β Bacteria Actinobacteria Actinobacteridae Actinomycetales Nocardiopsaceae Thermobifida Thermobifida fusca YX Tfus_Aa 637000319 269800 637683723 fig|269800.4.peg.70   - No Tfu_0043   cd04261 cd04913/cd04936 0 1 0   1 Yes No No 637686139     MEQ 1 423 0.23 1.5 0.15
26 β Bacteria Thermotogae Thermotogae (class) Thermotogales Thermotogaceae Thermotoga Thermotoga maritima MSB8 Tmar_Ab 637000321 243274 637005837 fig|243274.1.peg.541   - No TM0547 Hdh/Ask cd04261 cd04913/cd04936 1 0 0   2 Yes No No       VEN 2 415 0.48 1.09 0.44
26 β Bacteria Thermotogae Thermotogae (class) Thermotogales Thermotogaceae Thermotoga Thermotoga petrophila RKU-1 Tpet_Ab 640427150 390874 640562876 fig|390874.10.peg.374   - No Tpet_0373 Hdh/Ask cd04261 cd04913/cd04936 1 0 0   2 Yes No No       VEN 2 415 0.48 1.09 0.44
27 β Bacteria Proteobacteria Deltaproteobacteria Bdellovibrionales Bdellovibrionaceae Bdellovibrio Bdellovibrio bacteriovorus HD100 Bbac_Aa 637000030 264462 637481199 fig|264462.1.peg.481   - No Bd0528   cd04261   0 1 0   2 No No No       MFE 1 395 0.25 1.2 0.21
27 β Bacteria Proteobacteria Deltaproteobacteria Myxococcales Myxococcacea Anaeromyxobacter Anaeromyxobacter dehalogenans 2CP-C Adeh_Aa 637000007 290397 637865144 fig|290397.13.peg.3577   - No Adeh_3589   cd04261   0 1 0   2 Yes No No 637863174 637862929 637865489 VVK 1 387 0.25 1.28 0.2
27 β Bacteria Proteobacteria Deltaproteobacteria Myxococcales Myxococcaceae Myxococcus Myxococcus xanthus DK 1622 Mxan_Aa 637000186 246197 638026217 fig|246197.19.peg.4360   - No MXAN_4877   cd04246   0 1 0   4 Yes No No       VLS 3 397 0.75 1.36 0.55
28 β Bacteria Firmicutes Clostridia Clostridiales Clostridiaceae Clostridium Clostridium botulinum A ATCC 3502 Cbot_Ba 640427109 413999 640574950 fig|413999.4.peg.3200   fig|441770.4.peg.3162, Clostridium botulinum A str. ATCC 19397
fig|441771.4.peg.3044, Clostridium botulinum A str. Hall
 No CBO3337   cd04261 cd04913/cd04936 0 1 0   3 Yes No No 640573238 640573473   MNM 0 400 0 0.68 0
28 β Bacteria Firmicutes Clostridia Clostridiales Clostridiaceae Clostridium Clostridium difficile 630 Cdif_Aa 640069308 272563 640157892 fig|1496.1.peg.2725   - No CD2054   cd04261 cd04913/cd04936 0 1 0   2 Yes No No   640156958/640157389   MKL 0 397 0 0.62 0
29 β Bacteria Thermotogae Thermotogae (class) Thermotogales Thermotogaceae Thermotoga Thermotoga maritima MSB8 Tmar_Aa 637000321 243274 637006812 fig|243274.1.peg.1502   - No TM1518   cd04261 cd04891/cd04936 0 1 0   2 Yes No No       MVV 2 401 0.49 1.09 0.45
29 β Bacteria Thermotogae Thermotogae (class) Thermotogales Thermotogaceae Thermotoga Thermotoga petrophila RKU-1 Tpet_Aa 640427150 390874 640563799 fig|390874.10.peg.1284   - No Tpet_1274   cd04261 cd04891/cd04936 0 1 0   2 Yes No No       MVV 3 401 0.74 1.09 0.68
30 β Bacteria Firmicutes Bacilli Bacillales Staphylococcaceae Staphylococcus Staphylococcus aureus aureus COL Saur_Aa 637000273 93062 637152180 fig|93062.4.peg.1609   fig|93061.3.peg.1313, Staphylococcus aureus subsp. aureus NCTC 8325
fig|158878.1.peg.1393, Staphylococcus aureus subsp. aureus Mu50
fig|158879.1.peg.1268, Staphylococcus aureus subsp. aureus N315
fig|196620.1.peg.1281, Staphylococcus aureus subsp. aureus MW2
fig|282458.1.peg.1325, Staphylococcus aureus subsp. aureus MRSA252
fig|282459.1.peg.1322, Staphylococcus aureus subsp. aureus MSSA476
fig|359786.3.peg.470, Staphylococcus aureus subsp. aureus JH9
fig|359787.3.peg.1262, Staphylococcus aureus subsp. aureus JH1
fig|367830.3.peg.1350, Staphylococcus aureus subsp. aureus USA300
fig|418127.4.peg.1283, Staphylococcus aureus subsp. aureus Mu3
fig|426430.6.peg.1265, Staphylococcus aureus subsp. aureus str. Newman
 No SACOL1428   cd04261 cd04891/cd04923 1 0 0   2 Yes Yes No   637152115   MSN 1 401 0.24 0.74 0.32
30 β Bacteria Firmicutes Bacilli Bacillales Staphylococcaceae Staphylococcus Staphylococcus epidermidis RP62A Sepi_Aa 637000282 176279 637167618 fig|176279.3.peg.1042   fig|176280.1.peg.2503, Staphylococcus epidermidis ATCC 12228
 No SERP0963   cd04261 cd04891/cd04923 1 0 0   2 Yes Yes No   637167553   MSK 1 400 0.25 0.72 0.35
30 β Bacteria Firmicutes Bacilli Bacillales Staphylococcaceae Staphylococcus Staphylococcus haemolyticus JCSC1435 Shae_Aa 637000283 279808 637667503 fig|279808.3.peg.2248   - No SH1518   cd04261 cd04891/cd04923 1 0 0   2 Yes Yes No   637667564   MSR 1 400 0.25 0.77 0.32
30 β Bacteria Firmicutes Bacilli Bacillales Staphylococcaceae Staphylococcus Staphylococcus saprophyticus saprophyticus ATCC 15305 Ssap_Aa 637000284 342451 637696748 fig|342451.4.peg.694   - No SSP1357   cd04261 cd04891/cd04923 1 0 0   2 Yes Yes No   637696829   MPQ 1 402 0.24 0.77 0.31
31 β Bacteria Spirochaetes Spirochaetes (class) Spirochaetales Leptospiraceae Leptospira Leptospira borgpetersenii sv Hardjo-bovis JB197 Lbor_Ba 639633032 355277 639658115 - - No LBJ_0538   cd04261 cd04913/cd04936 0 1 0   1 Yes No Yes 639660167     MEK 1 405 0.24 1.06 0.23
31 β Bacteria Spirochaetes Spirochaetes (class) Spirochaetales Leptospiraceae Leptospira Leptospira interrogans sv Copenhageni Fiocruz L1-130 Lint_Aa 637000150 267671 637497785 fig|267671.1.peg.2825   fig|189518.1.peg.693, Leptospira interrogans serovar Lai str. 56601
 No LIC12909   cd04261 cd04913/cd04936 0 1 0   1 Yes No Yes 637495490     MEK 1 410 0.24 1.14 0.21
32 β Bacteria Cyanobacteria Cyanobacteria Nostocales Nostocaceae Anabaena Anabaena variabilis ATCC 29413 Avar_Aa 637000006 240292 637718993 fig|240292.3.peg.4659   - No Ava_3642   cd04261 cd04913/cd04936/cd04913/cd04936 1 0 0   1 Yes Yes No 637716112     absent 3 604 0.49 1.43 0.34
32 β Bacteria Cyanobacteria Gloeobacteria Gloeobacterales unclassified Gloeobacter Gloeobacter violaceus PCC 7421 Gvio_Aa 637000121 251221 637459166 fig|251221.1.peg.1774   - No gll1774   cd04246 cd04913/cd04936/cd04913/cd04936 0 1 0   1 Yes No No 637461712     absent 2 601 0.33 1.5 0.22
32 β Bacteria Cyanobacteria Cyanobacteria Nostocales Nostocaceae Nostoc Nostoc sp. PCC 7120 NOST-3a 637000199 103690 637234036 fig|103690.1.peg.3951   - No alr3644   cd04261 cd04913/cd04936/cd04913/cd04936 1 0 0   1 Yes Yes No 637234518     absent 3 606 0.49 1.43 0.34
32 β Bacteria Cyanobacteria Cyanobacteria Prochlorales Prochlorococcaceae Prochlorococcus Prochlorococcus marinus MIT 9313 Pmar_Aa 637000211 74547 637446744 fig|74547.1.peg.73   fig|59919.1.peg.1644, Prochlorococcus marinus subsp. pastoris str. CCMP1986
fig|59920.3.peg.1008, Prochlorococcus marinus str. NATL2A
fig|74546.3.peg.1718, Prochlorococcus marinus str. MIT 9312
fig|93059.3.peg.1566, Prochlorococcus marinus str. MIT 9211
fig|167539.1.peg.1805, Prochlorococcus marinus subsp. marinus str. CCMP1375
 No PMT0073   cd04261 cd04913/cd04936/cd04913/cd04936 1 0 0   1 Yes Yes No 637447837     absent 2 595 0.33 1.72 0.19
32 β Bacteria Cyanobacteria Cyanobacteria Prochlorales Prochlorococcaceae Prochlorococcus Prochlorococcus marinus NATL2A Pmar_Ba 637000212 59920 637688122 fig|59920.3.peg.1008   fig|59919.1.peg.1644, Prochlorococcus marinus subsp. pastoris str. CCMP1986
fig|74546.3.peg.1718, Prochlorococcus marinus str. MIT 9312
fig|93059.3.peg.1566, Prochlorococcus marinus str. MIT 9211
fig|167539.1.peg.1805, Prochlorococcus marinus subsp. marinus str. CCMP1375
fig|74547.1.peg.73, Prochlorococcus marinus str. MIT 9313
 No PMN2A_1246   cd04261 cd04913/cd04936/cd04913/cd04936 1 0 0   1 Yes Yes No 637687565     absent 2 588 0.34 1.42 0.24
32 β Bacteria Cyanobacteria Cyanobacteria Prochlorales Prochlorococcaceae Prochlorococcus Prochlorococcus marinus pastoris CCMP1986 Pmar_Ca 637000214 59919 637450680 fig|59919.1.peg.1644   fig|59920.3.peg.1008, Prochlorococcus marinus str. NATL2A
fig|74546.3.peg.1718, Prochlorococcus marinus str. MIT 9312
fig|93059.3.peg.1566, Prochlorococcus marinus str. MIT 9211
fig|167539.1.peg.1805, Prochlorococcus marinus subsp. marinus str. CCMP1375
fig|74547.1.peg.73, Prochlorococcus marinus str. MIT 9313
 No PMM1648   cd04261 cd04913/cd04936/cd04913/cd04936 1 0 0   1 Yes Yes No 637450066     absent 0 586 0 1.25 0
32 β Bacteria Cyanobacteria unclassified Chroococcales unclassified Synechococcus Synechococcus elongatus PCC 6301 Selo_Aa 637000307 269084 637616190 fig|269084.3.peg.2330   fig|1140.3.peg.397, Synechococcus elongatus PCC 7942
 No syc0544_d   cd04261 cd04913/cd04936/cd04913/cd04936 0 1 0   1 Yes No No 637617692     absent 1 597 0.16 1.74 0.09
32 β Bacteria Cyanobacteria unclassified Chroococcales unclassified Synechococcus Synechococcus sp. RCC307 SYNE-11a 640427148 316278 640544992 - - No SynRCC307_0075   cd04261 cd04913/cd04936/cd04913/cd04936 0 1 0   1 Yes Yes No 640545662     absent 3 600 0.5 1.82 0.27
32 β Bacteria Cyanobacteria unclassified Chroococcales unclassified Synechocystis Synechocystis sp. PCC 6803 SYNE-4a 637000315 1148 637012447 fig|1148.1.peg.2965   - No slr0657   cd04261 cd04913/cd04936/cd04913/cd04936 1 0 0   1 Yes Yes No 637011825     absent 2 600 0.33 1.55 0.21
32 β Bacteria Cyanobacteria unclassified Chroococcales unclassified Thermosynechococ Thermosynechococcus elongatus BP-1 Telo_Aa 637000320 197221 637314463 fig|197221.1.peg.1832   - No tlr1833   cd04246 cd04913/cd04936/cd04913/cd04936 0 1 0   1 Yes No No 637312884     absent 1 599 0.16 1.7 0.09
32 β Bacteria Cyanobacteria unclassified Oscillatoriales unclassified Trichodesmium Trichodesmium erythraeum IMS101 Tery_Aa 637000329 203124 638105447 fig|203124.1.peg.3709   - No Tery_0087   cd04261 cd04913/cd04936/cd04913/cd04936 0 1 0   1 Yes No No 638109440     absent 2 604 0.33 1.41 0.23
33 β Bacteria Firmicutes Bacilli Bacillales Bacillaceae Bacillus Bacillus anthracis Ames Bant_Aa 637000014 198094 637302205 fig|198094.1.peg.1661   fig|260799.1.peg.1651, Bacillus anthracis str. Sterne
fig|261591.3.peg.4467, Bacillus anthracis str. Vollum
fig|261594.1.peg.1968, Bacillus anthracis str. 'Ames Ancestor'
fig|280355.3.peg.3084, Bacillus anthracis str. A1055
fig|280477.3.peg.3181, Bacillus anthracis str. Australia 94
fig|205919.3.peg.1706, Bacillus anthracis str. Kruger B
 No BA1811   cd04261 cd04913/cd04936 1 0 0   2 Yes Yes No 637302346/637305803   637302942 MEQ 1 409 0.24 1.03 0.23
33 β Bacteria Firmicutes Bacilli Bacillales Bacillaceae Bacillus Bacillus cereus ATCC 10987 Bcer_Aa 637000016 222523 637278703 fig|222523.1.peg.1871   fig|269801.1.peg.1268, Bacillus cereus G9241
fig|288681.3.peg.1862, Bacillus cereus ZK
fig|226900.1.peg.1635, Bacillus cereus ATCC 14579
 No BCE_1883   cd04261 cd04913/cd04936 1 0 0   2 Yes Yes No 637278870/637282357   637279436 MEQ 1 409 0.24 1.02 0.24
33 β Bacteria Firmicutes Bacilli Bacillales Bacillaceae Bacillus Bacillus halodurans C-125 Bhal-1_Aa 637000020 272558 637059812 fig|272558.1.peg.3096   - No BH3096   cd04261 cd04913/cd04936 0 1 0   3 Yes Yes No 637060139 637057951 637058439 MEQ 1 412 0.24 1.13 0.21
33 β Bacteria Firmicutes Bacilli Bacillales Bacillaceae Bacillus Bacillus licheniformis ATCC 14580 (Goettingen) Blic_Ab 639279303 279010 639312137 fig|279010.5.peg.3345   - No BLi02996   cd04261 cd04913/cd04936 1 0 0   3 Yes Yes No 639312540     MEQ 1 409 0.24 1.02 0.24
33 β Bacteria Firmicutes Bacilli Bacillales Bacillaceae Bacillus Bacillus subtilis 168 Bsub_Aa 637000022 224308 637033007 fig|224308.1.peg.2850   - No BSU28470   cd04261 cd04892/cd04936 1 0 0   3 Yes Yes No 637033411     MEQ 1 408 0.24 1.03 0.23
33 β Bacteria Firmicutes Bacilli Bacillales Bacillaceae Bacillus Bacillus thuringiensis sv konkukian 97-27 Bthu_Aa 637000023 281309 637513088 fig|281309.3.peg.1740   fig|412694.5.peg.1592, Bacillus thuringiensis str. Al Hakam
 No BT9727_1658   cd04261 cd04913/cd04936 1 0 0   2 Yes Yes No 637513229/637516521   637513812 MEQ 1 409 0.24 1 0.24
33 β Bacteria Firmicutes Bacilli Bacillales Listeriaceae Listeria Listeria innocua Clip11262 Linn_Ab 637000152 272626 637223925 fig|272626.1.peg.1188   - No lin1198   cd04261 cd04913/cd04923 1 0 0   3 Yes Yes No 637225465     MEN 2 404 0.49 0.94 0.52
33 β Bacteria Firmicutes Bacilli Bacillales Listeriaceae Listeria Listeria monocytogenes 4b F2365 Lmon_Ab 637000154 265669 637164999 fig|265669.1.peg.1230   fig|267410.1.peg.2673, Listeria monocytogenes str. 4b H7858
fig|393117.3.peg.1055, Listeria monocytogenes FSL J1-194
fig|393121.3.peg.1063, Listeria monocytogenes FSL J2-071
fig|401650.3.peg.813, Listeria monocytogenes Aureli 1997
fig|169963.1.peg.1227, Listeria monocytogenes EGD-e
fig|267409.1.peg.2638, Listeria monocytogenes str. 1/2a F6854
fig|393123.3.peg.764, Listeria monocytogenes FSL N1-017
fig|393124.3.peg.831, Listeria monocytogenes FSL N3-165
fig|393128.3.peg.1006, Listeria monocytogenes F6900
fig|393130.3.peg.2332, Listeria monocytogenes J0161
fig|393133.3.peg.1154, Listeria monocytogenes 10403S
 No LMOf2365_1244   cd04261 cd04913/cd04923 1 0 0   3 Yes Yes No 637166319     MEN 2 404 0.49 0.92 0.53
33 β Bacteria Firmicutes Bacilli Bacillales Listeriaceae Listeria Listeria welshimeri sv 6b SLCC5334 Lwel_Ab 639633035 386043 639706078 fig|386043.6.peg.1159   - No lwe1190   cd04261 cd04913/cd04923 1 0 0   3 Yes Yes No 639707439     MEN 2 404 0.49 0.92 0.53
34 β Bacteria Proteobacteria Deltaproteobacteria Desulfobacterales Desulfobulbaceae Desulfococcus Desulfococcus oleovorans Hxd3 Dole_Aa 641228490 96561 641263370 fig|96561.3.peg.773   - No Dole_0773   cd04261 cd04913/cd04936 1 0 0   2 Yes No No 641262872     MEE 0 406 0 1.15 0
34 β Bacteria Proteobacteria Deltaproteobacteria Desulfovibrionales Desulfovibrionaceae Desulfovibrio Desulfovibrio desulfuricans G20 Ddes_Aa 637000095 207559 637782936 fig|207559.3.peg.2330   - No Dde_2048   cd04261 cd04913/cd04936 1 0 0   1 Yes No No 637783633     MEA 1 409 0.24 1.17 0.21
34 β Bacteria Proteobacteria Deltaproteobacteria Desulfovibrionales Desulfovibrionaceae Desulfovibrio Desulfovibrio vulgaris vulgaris DP4 Dvul_Aa 639633022 391774 639819482 fig|391774.5.peg.1291   fig|882.1.peg.1905, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
 No Dvul_1251   cd04261 cd04913/cd04936 1 0 0   1 Yes No No 639820337     MEE 1 408 0.24 1.18 0.2
34 β Bacteria Proteobacteria Deltaproteobacteria Desulfovibrionales Desulfovibrionaceae Lawsonia Lawsonia intracellularis PHE/MN1-00 Lint_Aa 637000145 363253 637988352 - - No LI1003   cd04246 cd04913/cd04936 1 0 0   1 No No No       MEE 1 410 0.24 1.14 0.21
34 β Bacteria Proteobacteria Deltaproteobacteria Syntrophobacterale Syntrophaceae Syntrophus Syntrophus aciditrophicus SB Saci-5_Aa 637000317 56780 637859864 fig|56780.10.peg.1523   - No SYN_02781   cd04261 cd04913/cd04936 0 1 0   1 Yes No No 637859957     MER 0 406 0 1.06 0
35 β Bacteria Proteobacteria Epsilonproteobacter Campylobacterales Campylobacteraceae Campylobacter Campylobacter jejuni jejuni NCTC 11168 Cjej_Aa 637000055 192222 637040134 fig|192222.1.peg.543   fig|195099.3.peg.449, Campylobacter jejuni RM1221
fig|354242.8.peg.611, Campylobacter jejuni subsp. jejuni 81-176
fig|360108.3.peg.1524, Campylobacter jejuni subsp. jejuni 260.94
fig|360110.3.peg.1596, Campylobacter jejuni subsp. jejuni 84-25
fig|360111.3.peg.295, Campylobacter jejuni subsp. jejuni CF93-6
fig|360112.3.peg.500, Campylobacter jejuni subsp. jejuni HB93-13
fig|360109.7.peg.1094, Campylobacter jejuni subsp. doylei 269.97
 No Cj0582   cd04261 cd04913/cd04936 0 1 0   1 Yes No No 637039718     MEQ 0 400 0 0.65 0
35 β Bacteria Proteobacteria Epsilonproteobacter Campylobacterales Helicobacteraceae Helicobacter Helicobacter acinonychis Sheeba Haci_Aa 637000130 382638 638058878 fig|382638.8.peg.1593   - No Hac_1646   cd04261 cd04913/cd04936 0 1 0   1 Yes No No 638058031     MET 0 405 0 0.69 0
35 β Bacteria Proteobacteria Epsilonproteobacter Campylobacterales Helicobacteraceae Helicobacter Helicobacter hepaticus ATCC 51449 Hhep_Aa 637000131 235279 637431648 fig|235279.1.peg.618   - No HH0618   cd04246 cd04913/cd04936 0 1 0   1 Yes No No 637432798     MEK 0 401 0 0.8 0
35 β Bacteria Proteobacteria Epsilonproteobacter Campylobacterales Helicobacteraceae Helicobacter Helicobacter pylori J99 Hpyl_Aa 637000134 85963 637023160 fig|85963.1.peg.1146   fig|85962.1.peg.1217, Helicobacter pylori 26695
 No jhp1150   cd04261 cd04913/cd04936 0 1 0   1 Yes No No 637022771     MET 1 405 0.24 0.69 0.35
35 β Bacteria Proteobacteria Epsilonproteobacter Campylobacterales Helicobacteraceae Sulfurimonas Sulfurimonas denitrificans DSM 1251 Sden-1_Aa 637000326 326298 637794082 fig|326298.3.peg.1178   - No Tmden_1650   cd04261 cd04913/cd04936 1 0 0   1 Yes No No 637794336     MEK 0 403 0 0.69 0
35 β Bacteria Proteobacteria Epsilonproteobacter Campylobacterales Helicobacteraceae Wolinella Wolinella succinogenes DSM 1740 Wsuc_Aa 637000341 273121 637456904 fig|273121.1.peg.1581   - No WS1729   cd04261 cd04913/cd04936 0 1 0   1 Yes No No 637455718     MEN 0 401 0 0.98 0
36 β Bacteria Proteobacteria Deltaproteobacteria Desulfuromonadales Geobacteraceae Geobacter Geobacter metallireducens GS-15 Gmet_Aa 637000119 269799 637779171 fig|269799.3.peg.2143   - No Gmet_1880   cd04261 cd04913/cd04936 0 1 0   1 Yes No No 637778913     MEA 1 405 0.24 1.04 0.23
36 β Bacteria Proteobacteria Deltaproteobacteria Desulfuromonadales Geobacteraceae Geobacter Geobacter sulfurreducens PCA Gsul_Aa 637000120 243231 637126486 fig|243231.1.peg.1787   - No GSU1799   cd04261 cd04913/cd04936 0 1 0   1 Yes No No 637126374     MEA 1 405 0.24 1 0.24
36 β Bacteria Proteobacteria Deltaproteobacteria Desulfuromonadales Geobacteraceae Geobacter Geobacter uraniumreducens Rf4 Gura_Aa 640427115 351605 640549814 fig|351605.4.peg.2278   - No Gura_2318   cd04261 cd04913/cd04936 0 1 0   1 Yes No No 640549675     MEA 1 407 0.24 1.04 0.23
36 β Bacteria Proteobacteria Deltaproteobacteria Desulfuromonadales Pelobacteraceae Pelobacter Pelobacter carbinolicus DSM 2380 Pcar_Aa 637000204 338963 637750598 fig|338963.3.peg.2078   - No Pcar_1006   cd04261 cd04913/cd04936 0 1 0   1 Yes No No 637751044     MET 0 410 0 1.1 0
36 β Bacteria Proteobacteria Deltaproteobacteria Desulfuromonadales Pelobacteraceae Pelobacter Pelobacter propionicus DSM 2379 Ppro_Aa 639633050 338966 639756310 fig|338966.5.peg.2255   - No Ppro_2262   cd04261 cd04913/cd04936 0 1 0   1 Yes No No 639755338     MEG 1 404 0.24 1.04 0.23
37 β Bacteria Proteobacteria Alphaproteobacteria Rhodospirillales Acetobacteraceae Acidiphilium Acidiphilium cryptum JF-5 Acry_Aa 640427101 349163 640552925 fig|349163.4.peg.1492   - No Acry_1008   cd04261 cd04913/cd04936 1 0 0   2 Yes No No 640553214     VEQ 3 405 0.74 1.3 0.57
37 β Bacteria Proteobacteria Alphaproteobacteria Rhizobiales Rhizobiaceae Agrobacterium Agrobacterium tumefaciens C58 (Dupont) Atum_Aa 639279302 176299 639299490 fig|176299.3.peg.3712   - No Atu4172   cd04261 cd04913/cd04936 1 0 0   1 Yes Yes No 639291704/639297076     VEQ 3 431 0.69 1.24 0.56
37 β Bacteria Proteobacteria Alphaproteobacteria Rhizobiales Brucellaceae Brucella Brucella abortus bv 1 9-941 Babo_Aa 637000039 262698 637645844 fig|262698.3.peg.1809   - No BruAb1_1850   cd04261 cd04913/cd04936 1 0 0   1 Yes No No 637645271     VEQ 3 423 0.7 1.19 0.59
37 β Bacteria Proteobacteria Alphaproteobacteria Rhizobiales Bartonellaceae Bartonella Bartonella henselae Houston-1 Bhen_Aa 637000027 283166 637510185 fig|283166.1.peg.371   - No BH04030   cd04261 cd04913/cd04936 1 0 0   1 Yes Yes No 637510747     VEQ 3 418 0.71 1.05 0.68
37 β Bacteria Proteobacteria Alphaproteobacteria Rhizobiales Bradyrhizobiaceae Bradyrhizobium Bradyrhizobium japonicum USDA 110 Bjap_Aa 637000038 224911 637367759 fig|224911.1.peg.216   - No blr0216   cd04261 cd04913/cd04936 1 0 0   1 Yes No No 637371929     MES 3 418 0.71 1.31 0.54
37 β Bacteria Proteobacteria Alphaproteobacteria Rhizobiales Brucellaceae Brucella Brucella melitensis 16M Bmel_Aa 637000040 224914 637247200 fig|224914.1.peg.189   - No BMEI0189   cd04261 cd04913/cd04936 1 0 0   1 Yes Yes No 637247757     VEQ 3 423 0.7 1.24 0.56
37 β Bacteria Proteobacteria Alphaproteobacteria Rhizobiales Bartonellaceae Bartonella Bartonella quintana Toulouse Bqui_Aa 637000028 283165 637508888 fig|283165.1.peg.264   - No BQ03060   cd04261 cd04913/cd04936 1 0 0   1 No No No       LEQ 3 418 0.71 1.05 0.68
37 β Bacteria Proteobacteria Alphaproteobacteria Rhizobiales Bradyrhizobiaceae Bradyrhizobium Bradyrhizobium sp. BTAi1 BRAD-1a 640427103 288000 640562247 fig|288000.5.peg.7372   - No BBta_7602   cd04261 cd04913/cd04936 1 0 0   1 Yes No No 640558829     MEN 3 418 0.71 1.34 0.53
37 β Bacteria Proteobacteria Alphaproteobacteria Rhizobiales Brucellaceae Brucella Brucella suis 1330 Bsui_Aa 637000042 204722 637330812 fig|204722.1.peg.1808   fig|470137.3.peg.3013, Brucella suis ATCC 23445
 No BR1871   cd04261 cd04913/cd04936 1 0 0   1 Yes Yes No 637330216     VEQ 3 423 0.7 1.21 0.58
37 β Bacteria Proteobacteria Alphaproteobacteria Caulobacterales Caulobacteraceae Caulobacter Caulobacter crescentus CB15 Ccre_Aa 637000061 190650 637086878 fig|190650.1.peg.840   - No CC0843   cd04261 cd04913/cd04936 1 0 0   1 Yes No No 637087427     MEK 2 415 0.48 1.41 0.34
37 β Bacteria Proteobacteria Alphaproteobacteria Sphingomonadales Sphingomonadaceae Erythrobacter Erythrobacter litoralis HTCC2594 Elit_Aa 637000103 314225 637858195 fig|314225.3.peg.109   - No ELI_14545   cd04261 cd04913/cd04936 1 0 0   1 Yes No No 637858041     MER 2 421 0.47 1.43 0.33
37 β Bacteria Proteobacteria Alphaproteobacteria Rhodospirillales Acetobacteraceae Granulobacter Granulobacter bethesdensis CGDNIH1 Gbet_Aa 637000123 391165 638128365 fig|391165.8.peg.606   - No GbCGDNIH1_0600   cd04261 cd04913/cd04936 1 0 0   1 Yes No No 638129228     VEK 2 409 0.48 1.37 0.35
37 β Bacteria Proteobacteria Alphaproteobacteria Rhodospirillales Acetobacteraceae Gluconobacter Gluconobacter oxydans 621H Goxy_Aa 637000122 290633 637622793 fig|290633.1.peg.36   - No GOX0037   cd04261 cd04913/cd04936 1 0 0   1 Yes No No 637624266     MEK 1 464 0.21 1.38 0.15
37 β Bacteria Proteobacteria Alphaproteobacteria Rhodobacterales Hyphomonadaceae Hyphomonas Hyphomonas neptunium ATCC 15444 Hnep_Ab 637000135 228405 638143191 fig|228405.5.peg.606   - No HNE_0618   cd04261 cd04913/cd04936 1 0 0   2 Yes No No 638144870     VEK 2 415 0.48 1.37 0.35
37 β Bacteria Proteobacteria Alphaproteobacteria Rhodobacterales Rhodobacteraceae Jannaschia Jannaschia sp. CCS1 JANN-1a 637000137 290400 637905562 - - No Jann_3191   cd04261 cd04913/cd04936 1 0 0   1 Yes Yes No 637905368     VEK 2 412 0.48 1.41 0.34
37 β Bacteria Proteobacteria Alphaproteobacteria Rhizobiales Phyllobacteriaceae Mesorhizobium Mesorhizobium sp. BNC1 MESO-1a 637000160 266779 638068891 fig|266779.1.peg.4305   - No Meso_3001   cd04261 cd04913/cd04936 1 0 0   1 Yes Yes No 638067817     VEQ 3 424 0.7 1.29 0.54
37 β Bacteria Proteobacteria Alphaproteobacteria Rhizobiales Phyllobacteriaceae Mesorhizobium Mesorhizobium loti MAFF303099 Mlot_Aa 637000159 266835 637076000 fig|266835.1.peg.2643   - No mll3437   cd04261 cd04913/cd04936 1 0 0   1 Yes Yes No 637074066     VEQ 3 417 0.71 1.36 0.52
37 β Bacteria Proteobacteria Alphaproteobacteria Rhodospirillales Rhodospirillaceae Magnetospirillum Magnetospirillum magneticum AMB-1 Mmag_Aa 637000155 342108 637820222 fig|342108.5.peg.1440   - No amb1612   cd04261 cd04913/cd04936 1 0 0   1 Yes No No 637822340     VEK 3 406 0.73 1.36 0.54
37 β Bacteria Proteobacteria Alphaproteobacteria Sphingomonadales Sphingomonadaceae Novosphingobium Novosphingobium aromaticivorans DSM 12444 Naro_Aa 640427126 279238 640446089 fig|48935.1.peg.3888   - No Saro_3304   cd04261 cd04913/cd04936 1 0 0   1 Yes No No 640442744     MEK 2 418 0.47 1.48 0.32
37 β Bacteria Proteobacteria Alphaproteobacteria Rhizobiales Bradyrhizobiaceae Nitrobacter Nitrobacter hamburgensis X14 Nham_Aa 637000192 323097 637969000 fig|323097.3.peg.14   - No Nham_0472   cd04261 cd04913/cd04936 1 0 0   1 Yes No No 637970770     MES 3 417 0.71 1.34 0.53
37 β Bacteria Proteobacteria Alphaproteobacteria Rhizobiales Bradyrhizobiaceae Nitrobacter Nitrobacter winogradskyi Nb-255 Nwin_Aa 637000193 323098 637711919 fig|323098.3.peg.848   - No Nwi_0379   cd04261 cd04913/cd04936 1 0 0   1 Yes No No 637713205     MES 3 417 0.71 1.3 0.55
37 β Bacteria Proteobacteria Alphaproteobacteria Rhodobacterales Rhodobacteraceae Paracoccus Paracoccus denitrificans PD1222 Pden_Aa 639633048 318586 639768181 fig|318586.4.peg.812   - No Pden_0862   cd04261 cd04913/cd04936 1 0 0   1 Yes Yes No 639770988     MES 3 418 0.71 1.47 0.48
37 β Bacteria Proteobacteria Alphaproteobacteria Rhodobacterales Rhodobacteraceae Roseobacter Roseobacter denitrificans OCh 114 Rden_Aa 639633056 375451 639635571 fig|375451.6.peg.2013   - No RD1_2157   cd04261 cd04913/cd04936 1 0 0   1 Yes Yes No 639635920     MES 4 412 0.97 1.36 0.71
37 β Bacteria Proteobacteria Alphaproteobacteria Rhizobiales Rhizobiaceae Rhizobium Rhizobium etli CFN 42 Retl_Aa 640427137 347834 640440767 - - No RHE_CH03758   cd04261 cd04913/cd04936 1 0 0   1 Yes Yes No 640438904     VEQ 3 424 0.7 1.3 0.54
37 β Bacteria Proteobacteria Alphaproteobacteria Rhizobiales Rhizobiaceae Rhizobium Rhizobium leguminosarum bv. viciae 3841 Rleg_Aa 639633055 216596 639650169 fig|216596.1.peg.4423   - No RL4284   cd04261 cd04913/cd04936 1 0 0   1 Yes Yes No 639647980   639651281 VEQ 3 424 0.7 1.31 0.53
37 β Bacteria Proteobacteria Alphaproteobacteria Rhizobiales Bradyrhizobiaceae Rhodopseudomonas Rhodopseudomonas palustris CGA009 Rpal_Aa 637000239 258594 637473735 fig|258594.1.peg.601   fig|316055.14.peg.158, Rhodopseudomonas palustris BisA53
fig|316056.14.peg.510, Rhodopseudomonas palustris BisB18
fig|316057.3.peg.223, Rhodopseudomonas palustris BisB5
fig|316058.9.peg.77, Rhodopseudomonas palustris HaA2
 No RPA0604   cd04261 cd04913/cd04936 1 0 0   1 Yes No No 637475635     MEN 3 417 0.71 1.28 0.55
37 β Bacteria Proteobacteria Alphaproteobacteria Rhodospirillales Rhodospirillaceae Rhodospirillum Rhodospirillum rubrum ATCC 11170 Rrub_Aa 637000241 269796 637824828 - fig|1085.1.peg.1602, Rhodospirillum rubrum
 No Rru_A0743   cd04261 cd04913/cd04936 1 0 0   1 Yes No No 637826518     VEK 2 406 0.49 1.25 0.39
37 β Bacteria Proteobacteria Alphaproteobacteria Rhodobacterales Rhodobacteraceae Rhodobacter Rhodobacter sphaeroides 2.4.1 Rsph_Aa 640069327 272943 640070008 fig|272943.3.peg.638   fig|349101.4.peg.588, Rhodobacter sphaeroides ATCC 17029
fig|349102.4.peg.597, Rhodobacter sphaeroides ATCC 17025
 No RSP_1849   cd04261 cd04913/cd04936 1 0 0   1 Yes No No 640071613     MES 3 419 0.71 1.39 0.51
37 β Bacteria Proteobacteria Alphaproteobacteria Sphingomonadales Sphingomonadaceae Sphingopyxis Sphingopyxis alaskensis RB2256 Sala_Aa 637000271 317655 638010522 fig|317655.9.peg.2070   - No Sala_2144   cd04261 cd04913/cd04936 1 0 0   2 Yes No No 638009171     MER 2 415 0.48 1.46 0.33
37 β Bacteria Proteobacteria Alphaproteobacteria Rhodobacterales Rhodobacteraceae Silicibacter Silicibacter sp. TM1040 SILI-1a 637000268 292414 638007250 fig|292414.1.peg.322   - No TM1040_1934   cd04261 cd04913/cd04936 1 0 0   2 Yes Yes No 638007484     MES 3 412 0.72 1.36 0.53
37 β Bacteria Proteobacteria Alphaproteobacteria Rhizobiales Rhizobiaceae Sinorhizobium Sinorhizobium meliloti 1021 Smel_Aa 637000269 266834 637183435 fig|266834.1.peg.3907   - No SMc02438   cd04261 cd04913/cd04936 1 0 0   1 Yes Yes No 637182536     VEQ 3 424 0.7 1.3 0.54
37 β Bacteria Proteobacteria Alphaproteobacteria Rhodobacterales Rhodobacteraceae Silicibacter Silicibacter pomeroyi DSS-3 Spom_Aa 637000267 246200 637290501 fig|246200.3.peg.3698   - No SPO3035   cd04261 cd04913/cd04936 1 0 0   1 Yes Yes No 637289215     MES 3 412 0.72 1.42 0.51
37 β Bacteria Proteobacteria Alphaproteobacteria Sphingomonadales Sphingomonadaceae Sphingomonas Sphingomonas wittichii RW1 Swit_Aa 640427144 392499 640584056 fig|392499.4.peg.4526   - No Swit_4503   cd04261 cd04913/cd04936 1 0 0   1 Yes No No 640584286     MER 2 418 0.47 1.39 0.34
37 β Bacteria Proteobacteria Alphaproteobacteria Sphingomonadales Sphingomonadaceae Zymomonas Zymomonas mobilis mobilis ZM4 Zmob_Aa 637000356 264203 637613104 fig|264203.3.peg.496   - No ZMO1653   cd04261 cd04913/cd04936 1 0 0   1 Yes No No 637611898     MER 2 423 0.47 1.27 0.37
38 β Bacteria Proteobacteria Alphaproteobacteria Rickettsiales Anaplasmataceae Anaplasma Anaplasma marginale St. Maries Amar_Aa 637000008 234826 637430489 fig|234826.3.peg.717   - No AM1005   cd04261 cd04913/cd04936 1 0 0   1 No No No       MES 1 412 0.24 0.85 0.28
38 β Bacteria Proteobacteria Alphaproteobacteria Rickettsiales Anaplasmataceae Ehrlichia Ehrlichia canis Jake Ecan_Aa 637000097 269484 637698756 fig|269484.4.peg.784   - No Ecaj_0808   cd04261 cd04913/cd04936 1 0 0   1 No No No       MES 2 417 0.47 0.62 0.76
38 β Bacteria Proteobacteria Alphaproteobacteria Rickettsiales Anaplasmataceae Ehrlichia Ehrlichia chaffeensis Arkansas Echa_Aa 637000098 205920 637902117 fig|205920.8.peg.817   - No ECH_1001   cd04261 cd04913/cd04936 1 0 0   1 No No No       MES 2 417 0.47 0.65 0.72
38 β Bacteria Proteobacteria Alphaproteobacteria Rickettsiales Anaplasmataceae Ehrlichia Ehrlichia ruminantium Gardel Erum_Aa 637000099 302409 637628496 fig|302409.3.peg.862   fig|254945.3.peg.756, Ehrlichia ruminantium str. Welgevonden
 No ERGA_CDS_08060   cd04261 cd04913/cd04936 1 0 0   1 No No No       MES 2 415 0.48 0.63 0.76
38 β Bacteria Proteobacteria Alphaproteobacteria Rickettsiales Rickettsiaceae Orientia Orientia tsutsugamushi Boryong Otsu_Aa 640427127 357244 640567981 - - No OTBS_1537   cd04246   1 0 0   1 No No No       MEQ 1 404 0.24 0.89 0.27
38 β Bacteria Proteobacteria Alphaproteobacteria Rickettsiales Rickettsiaceae Rickettsia Rickettsia bellii RML369-C Rbel_Aa 637000242 336407 637931534 fig|336407.4.peg.1101   - No RBE_1404   cd04261 cd04891/cd04923 1 0 0   1 No No No       MEK 1 406 0.24 0.75 0.32
38 β Bacteria Proteobacteria Alphaproteobacteria Rickettsiales Rickettsiaceae Rickettsia Rickettsia conorii Malish 7 Rcon_Aa 637000243 272944 637194422 fig|272944.1.peg.1164   - No RC1164   cd04261 cd00000cd04936 1 0 0   1 No No No       MEN 1 401 0.24 0.76 0.32
38 β Bacteria Proteobacteria Alphaproteobacteria Rickettsiales Rickettsiaceae Rickettsia Rickettsia felis URRWXCal2 Rfel_Aa 637000244 315456 637661583 fig|315456.3.peg.1200   - No RF_1200   cd04261 cd04891/cd04923 1 0 0   1 No No No       MEN 1 401 0.24 0.78 0.31
38 β Bacteria Proteobacteria Alphaproteobacteria Rickettsiales Rickettsiaceae Rickettsia Rickettsia prowazekii Madrid E Rpro_Aa 637000245 272947 637029943 fig|272947.1.peg.709   - No RP753   cd04261 cd00000cd04936 1 0 0   1 No No No       absent 1 446 0.22 0.71 0.31
38 β Bacteria Proteobacteria Alphaproteobacteria Rickettsiales Rickettsiaceae Rickettsia Rickettsia typhi Wilmington Rtyp_Aa 637000246 257363 637531302 fig|257363.1.peg.705   - No RT0738   cd04261 cd00000cd04936 1 0 0   1 No No No       absent 1 448 0.22 0.7 0.31
38 β Bacteria Proteobacteria Alphaproteobacteria Rickettsiales Rickettsiaceae Wolbachia Wolbachia endosymbiont of Drosophila melanogast Wend_a 637000339 163164 637173116 fig|163164.1.peg.855   - No WD0960   cd04261 cd00000cd04923 1 0 0   1 No No No       VLH 2 388 0.51 0.84 0.61
39 β Bacteria Proteobacteria Gammaproteobacteria-lower Alteromonadales Shewanellaceae Shewanella Shewanella amazonensis SB2B Sama_Aa 639633057 326297 639780388 fig|326297.7.peg.989   - No Sama_1049   cd04261 cd04891/cd04923 1 0 0   4 Yes Yes No       absent 0 403 0 1.27 0
39 β Bacteria Proteobacteria Gammaproteobacteria-lower Alteromonadales Shewanellaceae Shewanella Shewanella baltica OS155 Sbal_Aa 640069330 325240 640120373 fig|325240.9.peg.3467   fig|399599.3.peg.3327, Shewanella baltica OS195
fig|402882.10.peg.3329, Shewanella baltica OS185
 No Sbal_3114   cd04261 cd00000cd04936 1 0 0   4 Yes Yes No       absent 0 418 0 1.25 0
39 β Bacteria Proteobacteria Gammaproteobacteria-lower Alteromonadales Shewanellaceae Shewanella Shewanella oneidensis MR-1 Sone_Aa 637000258 211586 637345236 fig|211586.1.peg.3125   - No SO3427   cd04261 cd00000cd04936 1 0 0   4 Yes Yes No       absent 0 418 0 1.28 0
39 β Bacteria Proteobacteria Gammaproteobacteria-lower Alteromonadales Shewanellaceae Shewanella Shewanella putrefaciens CN-32 Sput_Aa 640427141 319224 640499938 fig|319224.13.peg.2526   - No Sputcn32_2744   cd04261 cd00000cd04936 1 0 0   4 Yes Yes No       absent 0 418 0 1.23 0
39 β Bacteria Proteobacteria Gammaproteobacteria-lower Alteromonadales Shewanellaceae Shewanella Shewanella sp. ANA-3 SHEW-3a 639633058 94122 639725672 fig|94122.5.peg.1250   - No Shewana3_1129   cd04261 cd00000cd04936 1 0 0   4 Yes Yes No       absent 0 418 0 1.25 0
39 β Bacteria Proteobacteria Gammaproteobacteria-lower Vibrionales Vibrionaceae Photobacterium Photobacterium profundum SS9 Ppro_Bb 637000206 298386 637587767 fig|298386.1.peg.5290   fig|314280.3.peg.3787, Photobacterium profundum 3TCK
 No PBPRA3066   cd04261   1 0 0   5 Yes Yes No       absent 1 392 0.25 1.28 0.2
39 β Bacteria Proteobacteria Gammaproteobacteria-lower Vibrionales Vibrionaceae Vibrio Vibrio cholerae O1 biovar eltor str. N16961 Vcho_Fe 637000333 243277 637047009 fig|243277.1.peg.539   fig|345073.6.peg.932, Vibrio cholerae O395
 No VC0547   cd04261   1 0 0   5 Yes Yes No       absent 1 395 0.25 1.32 0.19
39 β Bacteria Proteobacteria Gammaproteobacteria-lower Vibrionales Vibrionaceae Vibrio Vibrio fischeri ES114 Vfis_Aa 637000334 312309 637635181 fig|312309.3.peg.537   fig|388396.7.peg.632, Vibrio fischeri MJ11
 No VF0537   cd04261   0 1 0   5 Yes Yes No       absent 2 389 0.51 1.18 0.43
39 β Bacteria Proteobacteria Gammaproteobacteria-lower Vibrionales Vibrionaceae Vibrio Vibrio parahaemolyticus RIMD 2210633 Vpar_Aa 637000335 223926 637399543 fig|223926.1.peg.2547   - No VP2547   cd04261   1 0 0   5 Yes Yes No       absent 2 395 0.5 1.23 0.41
39 β Bacteria Proteobacteria Gammaproteobacteria-lower Vibrionales Vibrionaceae Vibrio Vibrio vulnificus CMCP6 Vvul_Ad 637000336 216895 637361949 fig|216895.1.peg.4790   fig|196600.1.peg.2870, Vibrio vulnificus YJ016
 No VV11594   cd04261   1 0 0   4 Yes Yes No       absent 3 384 0.78 1.27 0.61
40 β Bacteria Proteobacteria Betaproteobacteria Burkholderiales Comamonadaceae Acidovorax Acidovorax avenae citrulli AAC00-1 Aave_Aa 639633002 397945 639823527 fig|397945.5.peg.2008   - No Aave_2324   cd04261 cd04913/cd04936 0 1 0   1 Yes Yes No 639822431 639821227   MEQ 3 423 0.7 1.53 0.46
40 β Bacteria Proteobacteria Betaproteobacteria Burkholderiales Comamonadaceae Acidovorax Acidovorax sp. JS42 ACID-3a 639633003 232721 639838717 fig|232721.5.peg.1712   - No Ajs_1628   cd04261 cd04913/cd04936 0 1 0   1 Yes Yes No 639840246 639841193   MEK 3 422 0.71 1.54 0.46
40 β Bacteria Proteobacteria Betaproteobacteria Rhodocyclales Rhodocyclaceae Azoarcus Azoarcus sp. EbN1 AZOA-1a 637000012 76114 637607544 fig|76114.4.peg.883   - No ebA637   cd04261 cd04913/cd04936 0 1 0   1 Yes Yes No 637610082     MEQ 0 407 0 1.38 0
40 β Bacteria Proteobacteria Betaproteobacteria Burkholderiales Burkholderiaceae Burkholderia Burkholderia cepacia AMMD Bamb_Aa 637000047 339670 638149934 fig|339670.3.peg.3893   - No Bamb_2109   cd04261 cd04913/cd04936 0 1 0   1 Yes Yes No 638149606   638152130 MEK 2 417 0.47 1.38 0.34
40 β Bacteria Proteobacteria Betaproteobacteria Burkholderiales Alcaligenaceae Bordetella Bordetella bronchiseptica RB50 Bbro_Aa 637000032 257310 637103870 fig|257310.1.peg.1731   - No BB1739   cd04261 cd04913/cd04936 0 1 0   1 Yes Yes No 637104065     MEA 2 430 0.46 1.4 0.33
40 β Bacteria Proteobacteria Betaproteobacteria Burkholderiales Burkholderiaceae Burkholderia Burkholderia cenocepacia AU 1054 Bcen_Da 637000046 331271 638019283 fig|331271.3.peg.2038   fig|331272.3.peg.4705, Burkholderia cenocepacia HI2424
fig|350702.3.peg.2793, Burkholderia cenocepacia PC184
fig|216591.1.peg.7625, Burkholderia cenocepacia J2315
 No Bcen_6003   cd04261 cd04913/cd04936 0 1 0   1 Yes Yes No 638019515     MEK 2 417 0.47 1.39 0.34
40 β Bacteria Proteobacteria Betaproteobacteria Burkholderiales Burkholderiaceae Burkholderia Burkholderia mallei ATCC 23344 Bmal_Ca 637000048 243160 637562332 fig|243160.4.peg.932   fig|320386.3.peg.2861, Burkholderia mallei 10229
fig|320387.3.peg.4317, Burkholderia mallei 10399
fig|320388.3.peg.919, Burkholderia mallei SAVP1
fig|320389.3.peg.3091, Burkholderia mallei NCTC 10247
fig|320390.3.peg.1068, Burkholderia mallei GB8 horse 4
fig|334802.3.peg.3187, Burkholderia mallei FMH
fig|334803.3.peg.3270, Burkholderia mallei JHU
 No BMA1652   cd04261 cd04913/cd04936 0 1 0   1 Yes Yes No 637562090     MEK 2 416 0.48 1.31 0.37
40 β Bacteria Proteobacteria Betaproteobacteria Burkholderiales Alcaligenaceae Bordetella Bordetella parapertussis 12822 Bpar_Aa 637000033 257311 637109374 fig|257311.1.peg.2167   - No BPP2287   cd04261 cd04913/cd04936 0 1 0   1 Yes Yes No 637109559     MEA 2 430 0.46 1.41 0.33
40 β Bacteria Proteobacteria Betaproteobacteria Burkholderiales Alcaligenaceae Bordetella Bordetella pertussis Tohama I Bper_Aa 637000034 257313 637113122 fig|257313.1.peg.1675   - No BP1913   cd04261 cd04913/cd04936 0 1 0   1 Yes Yes No 637113924     MEA 2 421 0.47 1.41 0.33
40 β Bacteria Proteobacteria Betaproteobacteria Burkholderiales Burkholderiaceae Burkholderia Burkholderia pseudomallei 1710b Bpse_Ga 637000049 320372 637729133 fig|320372.3.peg.5620   fig|272560.3.peg.4504, Burkholderia pseudomallei K96243
fig|320371.3.peg.3173, Burkholderia pseudomallei 1710a
fig|331978.3.peg.3071, Burkholderia pseudomallei Pasteur
fig|320373.3.peg.3225, Burkholderia pseudomallei 668
fig|331109.3.peg.3843, Burkholderia pseudomallei 1655
fig|320374.3.peg.3601, Burkholderia pseudomallei S13
 No BURPS1710   cd04261 cd04913/cd04936 0 1 0   1 Yes Yes No 637728852     MEK 2 416 0.48 1.15 0.42
40 β Bacteria Proteobacteria Betaproteobacteria Burkholderiales Burkholderiaceae Burkholderia Burkholderia thailandensis E264 Btha_Aa 637000052 271848 637841614 - - No BTH_I1945   cd04261 cd04913/cd04936 0 1 0   1 Yes Yes No 637841867     MEK 2 416 0.48 1.35 0.36
40 β Bacteria Proteobacteria Betaproteobacteria Burkholderiales Burkholderiaceae Burkholderia Burkholderia sp. 383 BURK-1a 637000051 269483 637763687 fig|269483.3.peg.6757   - No Bcep18194   cd04261 cd04913/cd04936 0 1 0   1 Yes Yes No 637763451     MEK 2 417 0.47 1.41 0.33
40 β Bacteria Proteobacteria Betaproteobacteria Burkholderiales Burkholderiaceae Burkholderia Burkholderia vietnamiensis G4 Bvie_Aa 640069307 269482 640187751 fig|269482.4.peg.5297   - No Bcep1808_1976   cd04261 cd04913/cd04936 0 1 0   1 Yes Yes No 640187546     MEK 2 417 0.47 1.4 0.34
40 β Bacteria Proteobacteria Betaproteobacteria Burkholderiales Burkholderiaceae Burkholderia Burkholderia xenovorans LB400 Bxen_Aa 637000053 266265 637948002 fig|36873.1.peg.5522   - No Bxe_A1630   cd04261 cd04913/cd04936 0 1 0   1 Yes Yes No 637947257     MEK 2 416 0.48 1.37 0.35
40 β Bacteria Proteobacteria Betaproteobacteria Burkholderiales Burkholderiaceae Ralstonia Ralstonia eutropha H16 Cnec_Ba 640427136 381666 640447345 - fig|264198.3.peg.1628, Ralstonia eutropha JMP134
 No H16_A1225   cd04261 cd04913/cd04936 0 1 0   1 Yes Yes No 640448357     MEA 2 416 0.48 1.38 0.35
40 β Bacteria Proteobacteria Betaproteobacteria Neisseriales Neisseriaceae Chromobacterium Chromobacterium violaceum ATCC 12472 Cvio_Aa 637000074 243365 637451784 fig|243365.1.peg.1018   - No CV1018   cd04261 cd04913/cd04936 0 1 0   1 Yes Yes No 637451762     MEK 2 408 0.49 1.46 0.34
40 β Bacteria Proteobacteria Betaproteobacteria Rhodocyclales Rhodocyclaceae Dechloromonas Dechloromonas aromatica RCB Daro_Aa 637000088 159087 637680982 fig|159087.4.peg.2879   - No Daro_2515   cd04261 cd04913/cd04936 0 1 0   1 Yes Yes No 637680853     MEQ 0 406 0 1.35 0
40 β Bacteria Proteobacteria Betaproteobacteria Burkholderiales Oxalobacteraceae Herminiimonas Herminiimonas arsenicoxydans Hars_a 640069313 204773 640168614 fig|204773.3.peg.1221   - No HEAR1290   cd04261 cd04913/cd04936 0 1 0   1 Yes Yes No 640169447     MEQ 2 417 0.47 1.27 0.37
40 β Bacteria Proteobacteria Betaproteobacteria Methylophilales Methylophilaceae Methylobacillus Methylobacillus flagellatus KT Mfla_Aa 637000165 265072 637937467 fig|265072.7.peg.563   - No Mfla_0567   cd04261 cd04913/cd04936 0 1 0   1 Yes Yes No 637937804/637937948     MEQ 0 408 0 1.29 0
40 β Bacteria Proteobacteria Betaproteobacteria Burkholderiales unclassified Methylibium Methylibium petroleiphilum PM1 Mpet_Aa 640069319 420662 640091022 fig|420662.8.peg.2305   - No Mpe_A2452   cd04261 cd04913/cd04936 0 1 0   1 Yes Yes No 640090108     MEQ 3 453 0.66 1.51 0.44
40 β Bacteria Proteobacteria Betaproteobacteria Nitrosomonadales Nitrosomonadaceae Nitrosomonas Nitrosomonas europaea ATCC 19718 Neur_Aa 637000195 228410 637428452 fig|228410.1.peg.2035   - No NE2132   cd04261 cd04913/cd04936 0 1 0   1 Yes Yes No 637428683     MEQ 0 415 0 1.34 0
40 β Bacteria Proteobacteria Betaproteobacteria Nitrosomonadales Nitrosomonadaceae Nitrosomonas Nitrosomonas eutropha C71 Neut_Aa 637000196 335283 638132307 fig|335283.5.peg.2442   - No Neut_2084   cd04261 cd04913/cd04936 0 1 0   1 Yes Yes No 638131104     MEQ 1 415 0.24 1.34 0.18
40 β Bacteria Proteobacteria Betaproteobacteria Neisseriales Neisseriaceae Neisseria Neisseria gonorrhoeae FA 1090 Ngon_Aa 637000188 242231 637142190 fig|242231.4.peg.468   - No NGO0956   cd04261 cd04913/cd04936 0 1 0   1 Yes Yes No 637142036     MER 1 405 0.24 1.15 0.21
40 β Bacteria Proteobacteria Betaproteobacteria Neisseriales Neisseriaceae Neisseria Neisseria meningitidis FAM18 Nmen_Aa 639633045 272831 639828255 fig|487.2.peg.989   fig|122587.1.peg.1560, Neisseria meningitidis Z2491
fig|122586.1.peg.1440, Neisseria meningitidis MC58
 No NMC1429   cd04261 cd04913/cd04936 0 1 0 2re1 1 Yes Yes No 639828004     MER 1 405 0.24 1.18 0.2
40 β Bacteria Proteobacteria Betaproteobacteria Nitrosomonadales Nitrosomonadaceae Nitrosospira Nitrosospira multiformis ATCC 25196 Nmul_Aa 637000197 323848 637812028 fig|323848.3.peg.2115   - No Nmul_A194   cd04261 cd04913/cd04936 0 1 0   1 Yes Yes No 637811639     MER 0 409 0 1.3 0
40 β Bacteria Proteobacteria Betaproteobacteria Burkholderiales Comamonadaceae Polaromonas Polaromonas naphthalenivorans CJ2 Pnap_Aa 639633051 365044 639835896 - - No Pnap_2889   cd04261 cd04913/cd04936 0 1 0   1 Yes Yes No 639835241     MEK 3 422 0.71 1.42 0.5
40 β Bacteria Proteobacteria Betaproteobacteria Burkholderiales Comamonadaceae Polaromonas Polaromonas sp. JS666 POLA-1a 637000208 296591 637942524 fig|296591.1.peg.5451   - No Bpro_2860   cd04261 cd04913/cd04936 0 1 0   1 Yes Yes No 637941861/637944955     MEQ 3 422 0.71 1.42 0.5
40 β Bacteria Proteobacteria Betaproteobacteria Burkholderiales Burkholderiaceae Polynucleobacter Polynucleobacter sp. QLW-P1DMWA-1 POLY-1a 640427129 312153 640471021 fig|312153.3.peg.890   - No Pnuc_0862   cd04261 cd04913/cd04936 0 1 0   1 Yes Yes No 640470591     MEA 2 416 0.48 1.3 0.37
40 β Bacteria Proteobacteria Betaproteobacteria Burkholderiales Comamonadaceae Rhodoferax Rhodoferax ferrireducens T118 Rfer_Aa 637000235 338969 637916169 fig|338969.3.peg.2618   - No Rfer_1353   cd04261 cd04913/cd04936 0 1 0   1 Yes Yes No 637916732     MEQ 3 422 0.71 1.4 0.51
40 β Bacteria Proteobacteria Betaproteobacteria Burkholderiales Burkholderiaceae Ralstonia Ralstonia metallidurans CH34 Rmet_Aa 637000230 266264 637976470 fig|266264.4.peg.1494   - No Rmet_1089   cd04261 cd04913/cd04936 0 1 0   1 Yes Yes No 637977349     MEA 2 416 0.48 1.41 0.34
40 β Bacteria Proteobacteria Betaproteobacteria Burkholderiales Burkholderiaceae Ralstonia Ralstonia solanacearum GMI1000 Rsol_Aa 637000231 267608 637237540 fig|267608.1.peg.1171   - No RSc1171   cd04261 cd04913/cd04936 0 1 0   1 Yes Yes No 637237705     MEA 2 416 0.48 1.42 0.34
40 β Bacteria Proteobacteria Betaproteobacteria Hydrogenophilales Hydrogenophilaceae Thiobacillus Thiobacillus denitrificans ATCC 25259 Tden_Aa 637000324 292415 637709650 fig|292415.3.peg.596   - No Tbd_0969   cd04261 cd04913/cd04936 0 1 0   1 Yes Yes No 637709521     MEQ 0 409 0 1.35 0
40 β Bacteria Proteobacteria Betaproteobacteria Burkholderiales Comamonadaceae Verminephrobacte Verminephrobacter eiseniae EF01-2 Veis_Aa 639633065 391735 639852675 fig|391735.5.peg.4540   - No Veis_4940   cd04261 cd04913/cd04936 0 1 0   1 Yes Yes No 639850427     MEQ 3 422 0.71 1.44 0.49
41 β Bacteria Proteobacteria Gammaproteobacteria-upper Pseudomonadales Moraxellaceae Acinetobacter Acinetobacter sp. ADP1 ACIN-1a 637000002 62977 637517791 fig|62977.3.peg.321   - No ACIAD1252   cd04261 cd04913/cd04936 0 1 0   1 Yes Yes No 637516863     MEQ 1 426 0.23 1.27 0.18
41 β Bacteria Proteobacteria Gammaproteobacteria-upper Pseudomonadales Moraxellaceae Psychrobacter Psychrobacter arcticus 273-4 Parc_Aa 637000226 259536 637670150 fig|259536.4.peg.1297   - No Psyc_1461   cd04261 cd04913/cd04936 0 1 0   1 Yes Yes No 637668940     MEQ 1 428 0.23 1.14 0.2
41 β Bacteria Proteobacteria Gammaproteobacteria-upper Pseudomonadales Moraxellaceae Psychrobacter Psychrobacter cryohalolentis K5 Pcry_Aa 637000227 335284 637974104 fig|335284.3.peg.1673   - No Pcryo_1639   cd04261 cd04913/cd04936 0 1 0   1 Yes Yes No 637972728     MEQ 1 428 0.23 1.16 0.2
41 β Bacteria Proteobacteria Gammaproteobacteria-upper Pseudomonadales Moraxellaceae Psychrobacter Psychrobacter sp. PRwf-1 PSYC-4a 640427134 349106 640599834 fig|349106.5.peg.1695   fig|259536.4.peg.1297, Psychrobacter sp. 273-4
 No PsycPRwf_1612   cd04261 cd04913/cd04936 0 1 0   1 Yes Yes No 640600242     MEQ 1 427 0.23 1.16 0.2
42 β Bacteria Proteobacteria Gammaproteobacteria-upper sulfur-oxidizing unclassified unclassified Candidatus Vesicomyosocius okutanii HA Voku_Aa 640427107 412965 640538005 fig|412965.6.peg.531   - No COSY_0540   cd04261 cd04913/cd04936 0 1 0   1 Yes No No 640538170     VEQ 0 407 0 0.89 0
42 β Bacteria Proteobacteria Gammaproteobacteria-upper unclassified unclassified Ruthia Candidatus Ruthia magnifica Cm Rmag_Aa 639633019 413404 639758237 fig|413404.7.peg.640   - No Rmag_0585   cd04261 cd04913/cd04936 0 1 0   1 Yes Yes No 639758402     VEQ 0 407 0 0.9 0
43 β Bacteria Proteobacteria Gammaproteobacteria-upper Alteromonadales Alteromonadaceae Marinobacter Marinobacter aquaeolei VT8 Mhyd_Aa 639633037 351348 639810929 fig|351348.5.peg.1298   - No Maqu_0966   cd04261 cd04913/cd04936 1 0 0   2 Yes Yes No 639812248     MEQ 0 412 0 1.42 0
43 β Bacteria Proteobacteria Gammaproteobacteria-upper Alteromonadales Alteromonadaceae Saccharophagus Saccharophagus degradans 2-40 Sdeg_Aa 637000249 203122 637920374 fig|203122.12.peg.1298   - No Sde_1300   cd04261 cd04913/cd04936 1 0 0   2 Yes Yes No 637920283     MEQ 0 408 0 1.35 0
43 β Bacteria Proteobacteria Gammaproteobacteria-upper Oceanospirillales Alcanivoracaceae Alcanivorax Alcanivorax borkumensis SK2 Abor_Aa 637000004 393595 638079904 fig|393595.12.peg.1801   - No ABO_1797   cd04261 cd04913/cd04936 0 1 0   1 Yes Yes No 638078892     MEK 0 408 0 1.45 0
43 β Bacteria Proteobacteria Gammaproteobacteria-upper Oceanospirillales Hahellaceae Hahella Hahella chejuensis KCTC 2396 Hche_Aa 637000128 349521 637835465 fig|349521.5.peg.4573   - No HCH_5208   cd04261 cd04913/cd04936 1 0 0   1 Yes Yes No 637832160     MEQ 0 408 0 1.39 0
43 β Bacteria Proteobacteria Gammaproteobacteria-upper Oceanospirillales Oceanospirillaceae Marinomonas Marinomonas sp. MWYL1 MARI_Aa 640753033 400668 640806010 fig|400668.6.peg.3703   - No Mmwyl1_3627   cd04261 cd04913/cd04936 0 1 0   2 Yes Yes No 640806148     MEQ 0 413 0 1.25 0
43 β Bacteria Proteobacteria Gammaproteobacteria-upper Pseudomonadales Pseudomonadaceae Azotobacter Azotobacter vinelandii AvOP Avin_Aa 638341010 322710 638377748 fig|354.1.peg.2648   - No AvinDRAFT_4829   cd04261 cd04913/cd04936 1 0 0   1 Yes Yes No 638378992     MEQ 0 411 0 1.41 0
43 β Bacteria Proteobacteria Gammaproteobacteria-upper Pseudomonadales Pseudomonadaceae Pseudomonas Pseudomonas aeruginosa PAO1 Paer_Aa 637000218 208964 637051291 fig|208964.1.peg.905   fig|208963.3.peg.2535, Pseudomonas aeruginosa UCBPP-PA14
fig|350703.3.peg.1081, Pseudomonas aeruginosa 2192
 No PA0904   cd04261 cd04913/cd04936 1 0 0   1 Yes Yes No 637054155     MEQ 0 412 0 1.48 0
43 β Bacteria Proteobacteria Gammaproteobacteria-upper Pseudomonadales Pseudomonadaceae Pseudomonas Pseudomonas entomophila L48 Pent_Aa 637000219 384676 638002792 fig|384676.6.peg.3334   - No PSEEN3874   cd04261 cd04913/cd04936 1 0 0   1 Yes Yes No 638003150     MEQ 0 411 0 1.46 0
43 β Bacteria Proteobacteria Gammaproteobacteria-upper Pseudomonadales Pseudomonadaceae Pseudomonas Pseudomonas fluorescens Pf-5 Pflu_Aa 637000220 220664 637321842 fig|220664.3.peg.5000   fig|205922.3.peg.4809, Pseudomonas fluorescens PfO-1
fig|216595.1.peg.6472, Pseudomonas fluorescens SBW25
 No PFL_4505   cd04261 cd04913/cd04936 1 0 0   1 Yes Yes No 637318443   637321146 MEQ 0 413 0 1.47 0
43 β Bacteria Proteobacteria Gammaproteobacteria-upper Pseudomonadales Pseudomonadaceae Pseudomonas Pseudomonas mendocina ymp Pmen_Aa 640427131 399739 640504157 fig|399739.6.peg.2808   - No Pmen_2902   cd04261 cd04913/cd04936 1 0 0   1 Yes Yes No 640504650   640503253 MEQ 0 424 0 1.45 0
43 β Bacteria Proteobacteria Gammaproteobacteria-upper Pseudomonadales Pseudomonadaceae Pseudomonas Pseudomonas putida F1 Pput_Aa 640427132 351746 640585907 fig|351746.4.peg.1423   fig|160488.1.peg.4414, Pseudomonas putida KT2440
fig|76869.3.peg.3952, Pseudomonas putida GB-1
fig|390235.3.peg.3738, Pseudomonas putida W619
 No Pput_1442   cd04261 cd04913/cd04936 1 0 0   1 Yes Yes No 640588728   640585156 MEQ 0 411 0 1.44 0
43 β Bacteria Proteobacteria Gammaproteobacteria-upper Pseudomonadales Pseudomonadaceae Pseudomonas Pseudomonas stutzeri A1501 Pstu_Aa 640427133 379731 640487327 - - No PST_1370   cd04261 cd04913/cd04936 1 0 0   2 Yes Yes No 640487154     MEQ 0 412 0 1.43 0
43 β Bacteria Proteobacteria Gammaproteobacteria-upper Pseudomonadales Pseudomonadaceae Pseudomonas Pseudomonas syringae pv. syringae B728a Psyr_Aa 637000224 205918 637653910 fig|205918.4.peg.3992   fig|223283.1.peg.1805, Pseudomonas syringae pv. tomato str. DC3000
fig|264730.3.peg.3410, Pseudomonas syringae pv. phaseolicola 1448A
 No Psyr_3555   cd04261 cd04913/cd04936 1 0 0   1 Yes Yes No 637651629     MEQ 0 410 0 1.37 0
44 β Bacteria Chloroflexi Dehalococcoidetes Dehalococcoides unclassified Dehalococcoides Dehalococcoides ethenogenes 195 Deth_Aa 637000089 243164 637121190 fig|243164.3.peg.1571   - No DET1633   cd04246 cd04913/cd04936 0 1 0   1 Yes No No 637120769     MEI 0 405 0 1.03 0
44 β Bacteria Chloroflexi Dehalococcoidetes Dehalococcoides unclassified Dehalococcoides Dehalococcoides sp. CBDB1 DEHA-1a 637000090 255470 637704070 fig|255470.3.peg.656   fig|216389.5.peg.1363, Dehalococcoides sp. BAV1
 No cbdb_A173   cd04246 cd04913/cd04936 0 1 0   1 Yes No No 637703545     MEI 0 405 0 1.06 0
45 β Bacteria Firmicutes Clostridia Clostridiales Peptococcaceae Desulfotomaculum Desulfotomaculum reducens MI-1 Dred_Ab 640069310 349161 640180336 fig|349161.4.peg.1149   - No Dred_1167   cd04261 cd04913/cd04936 1 0 0   2 Yes No No 640180334     MEN 0 412 0 0.94 0
45 β Bacteria Firmicutes Clostridia Clostridiales Peptococcaceae Pelotomaculum Pelotomaculum thermopropionicum SI Pthe_Aa 640427128 370438 640527571 - - No PTH_1599   cd04246 cd04913/cd04936 0 1 0   2 Yes No No 640527573     MEK 0 407 0 0.98 0
45 β Bacteria Firmicutes Clostridia Clostridiales Syntrophomonadaceae Caldicellulosiru Caldicellulosiruptor saccharolyticus DSM 8903 Csac_Aa 640427106 351627 640495342 fig|351627.4.peg.940   - No Csac_0991   cd04246 cd04913/cd04936 0 1 0   1 Yes No No   640495344   VEK 1 409 0.24 0.86 0.28
46 β Bacteria Proteobacteria Gammaproteobacteria-upper Chromatiales Chromatiaceae Nitrosococcus Nitrosococcus oceani ATCC 19707 Noce_Aa 637000194 323261 637737435 fig|323261.3.peg.1079   - No Noc_0927   cd04261 cd04913/cd04936 1 0 0   2 Yes Yes No 637738933     MEE 0 413 0 1.48 0
46 β Bacteria Proteobacteria Gammaproteobacteria-upper Chromatiales Ectothiorhodospiraceae Alkalilimnicola Alkalilimnicola ehrlichei MLHE-1 Aehr_Aa 637000005 187272 638126238 fig|187272.6.peg.1420   - No Mlg_1480   cd04261 cd04913/cd04936 0 1 0   1 Yes Yes No 638126578     MEE 0 416 0 1.52 0
46 β Bacteria Proteobacteria Gammaproteobacteria-upper Chromatiales Ectothiorhodospiraceae Halorhodospira Halorhodospira halophila SL1 Hhal_Aa 639633026 349124 639856119 fig|349124.5.peg.1621   - No Hhal_1652   cd04261 cd04913/cd04936 1 0 0   1 Yes Yes No 639854583     MEE 0 416 0 1.43 0
47 α Bacteria Bacteroidetes Sphingobacteria Sphingobacteriales Crenotrichaceae Salinibacter Salinibacter ruber DSM 13855 Srub_Ab 637000250 309807 637843484 fig|309807.5.peg.443   - No SRU_0481   cd04243   1 0 0   4 Yes No No     637843485 absent 6 317 1.89 1.25 1.51
47 α Bacteria Bacteroidetes Sphingobacteria Sphingobacteriales Crenotrichaceae Salinibacter Salinibacter ruber DSM 13855 Srub_Aa 637000250 309807 637844738 fig|309807.5.peg.1651   - No SRU_1745   cd04243   1 0 0   4 Yes No No     637843485 absent 2 310 0.64 1.25 0.51
48 β Bacteria Proteobacteria Gammaproteobacteria-lower Aeromonadales Aeromonadaceae Aeromonas Aeromonas hydrophila hydrophila ATCC 7966 Ahyd_Aa 639633004 380703 639716287 fig|380703.5.peg.3520   - No AHA_3713   cd04261 cd04913/cd04936 0 1 0   4 Yes Yes No       MEA 1 415 0.24 1.47 0.16
48 β Bacteria Proteobacteria Gammaproteobacteria-lower Aeromonadales Aeromonadaceae Aeromonas Aeromonas salmonicida salmonicida A449 Asal_Aa 641522605 382245 640466692 fig|382245.6.peg.3573   - No ASA_3812   cd04261 cd04913/cd04936 0 1 0   4 Yes Yes No       MEA 1 415 0.24 1.51 0.16
49 α Archaea Crenarchaeota Thermoprotei marine archaeal group 1 Nitrosopumilaceae Nitrosopumilus Nitrosopumilus maritimus SCM1 Nmar_Aa 641228499 436308 641315811 fig|436308.3.peg.189   - No Nmar_0193   cd04243 cd00000cd04892 1 0 0   2 Yes No No     641316332 absent 2 471 0.42 0.89 0.47
49 α Archaea Crenarchaeota Thermoprotei Cenarchaeales Cenarchaeaceae Cenarchaeum Cenarchaeum symbiosum A Csym_Aa 641522613 414004 641735396 - - No CENSYa_1371   cd04234   KFGS 0 0   2 Yes No No     641734288 absent 2 471 0.42 0.85 0.49
50 α Archaea Crenarchaeota Thermoprotei marine archaeal group 1 Nitrosopumilaceae Nitrosopumilus Nitrosopumilus maritimus SCM1 Nmar_Ab 641228499 436308 641317409 fig|436308.3.peg.1750   - No Nmar_1754   cd04244 cd04921/cd04924 0 1 0   2 Yes No No     641316332 absent 1 467 0.21 0.89 0.24
50 α Archaea Crenarchaeota Thermoprotei Cenarchaeales Cenarchaeaceae Cenarchaeum Cenarchaeum symbiosum A Csym_Ab 641522613 414004 641735448 - - No CENSYa_1423   cd04244 cd04921/cd04924 0 1 0   2 Yes No No     641734288 absent 2 470 0.42 0.85 0.49
51 β Bacteria Proteobacteria Alphaproteobacteria Rhodobacterales Hyphomonadaceae Maricaulis Maricaulis maris MCS10 Mmar_Aa 637000157 394221 638141761 fig|394221.5.peg.2220   - No Mmar10_2259   cd04261 cd04913/cd04936 1 0 0   3 Yes No No     638142117 VVS 1 405 0.24 1.43 0.17
51 β Bacteria Proteobacteria Alphaproteobacteria Rhodobacterales Hyphomonadaceae Oceanicaulis Oceanicaulis alexandrii HTCC2633 Oale_Aa 638341138 314254 638891510 fig|314254.3.peg.2297   - No OA2633_06799   cd04261 cd00000cd04936 1 0 0   3 Yes No No     638891809 VTP 1 411 0.24 1.31 0.18
52 α Bacteria Proteobacteria Alphaproteobacteria Rhodobacterales Hyphomonadaceae Maricaulis Maricaulis maris MCS10 Mmar_Ac 637000157 394221 638140576 fig|394221.5.peg.1069   - Yes Mmar10_1098 Ask/Hdh cd04243   KFGS 0 0   3 Yes No No     638142117 absent 1 323 0.3 1.43 0.21
52 α Bacteria Proteobacteria Alphaproteobacteria Rhodobacterales Hyphomonadaceae Oceanicaulis Oceanicaulis alexandrii HTCC2633 Oale_Ac 638341138 314254 638891831 fig|314254.3.peg.2638   - Yes OA2633_08389 Ask/Hdh cd04234   1 0 0   3 Yes No No     638891809 absent 0 268 0 1.31 0
99 α Archaea Euryarchaeota Methanopyri Methanopyrales Methanopyraceae Methanopyrus Methanopyrus kandleri AV19 Mkan_Ab 638154507 190192 638168109 fig|190192.1.peg.109   - No MK0109   cd04244 cd04921/cd04924 1 0 0   2 Yes No Yes     638169614 absent 2 467 0.42 1.24 0.34
99 α Bacteria Acidobacteria Solibacteres Solibacterales Solibacteraceae Solibacter Solibacter usitatus Ellin6076 Susi_Ab 639633060 234267 639679600 fig|234267.9.peg.50   - No Acid_0052   cd04243 cd04892/cd04892 1 0 0   2 Yes No No 639680070   639686527 absent 3 490 0.61 1.47 0.41
99 β Bacteria Actinobacteria Actinobacteridae Actinomycetales Frankiaceae Frankia Frankia sp. CcI3 FRAN-2a 637000116 106370 637879407 fig|106370.11.peg.2049   - No Francci3_2071   cd04246   0 1 0   2 Yes No No 637881051     absent 3 408 0.73 1.44 0.51
99 β Bacteria Actinobacteria Actinobacteridae Actinomycetales Frankiaceae Frankia Frankia alni ACN14a Faln_Aa 637000115 326424 638099125 - - No FRAAL2411   cd04246   1 0 0   2 Yes No No 638102598     absent 2 414 0.48 1.41 0.34
99 β Bacteria Actinobacteria Actinobacteridae Actinomycetales Microbacteriaceae Tropheryma Tropheryma whipplei TW08/27 Twhi_Aa 637000330 218496 637381758 fig|218496.1.peg.691   fig|203267.1.peg.708, Tropheryma whipplei str. Twist
 No TW725   cd04261 cd04913/cd04936 0 1 0   1 Yes No No   637381345   MEE 0 418 0 1 0
99 β Bacteria Actinobacteria Actinobacteridae Actinomycetales Streptomycetaceae Streptomyces Streptomyces griseus subsp. griseus NBRC 13350 Sgri_Ab 641522653 455632 641698599 - - No SGR_4250   cd04246 cd00000cd4936 0 1 0   2 Yes No No 641696496     MLE 0 427 0 1.46 0
99 α Bacteria Actinobacteria Rubrobacteridae Rubrobacterales Rubrobacteraceae Rubrobacter Rubrobacter xylanophilus DSM 9941 Rxyl_Aa 637000248 266117 638035880 fig|266117.6.peg.1000   - No Rxyl_1090   cd04243   1 0 0   2 Yes No No     638035881 absent 2 425 0.47 1.25 0.38
99 β Bacteria Actinobacteria Rubrobacteridae Rubrobacterales Rubrobacteraceae Rubrobacter Rubrobacter xylanophilus DSM 9941 Rxyl_Ab 637000248 266117 638034891 fig|266117.6.peg.91   - No Rxyl_0098   cd04261 cd04913/cd04936 0 1 0   2 Yes No No     638035881 VEH 1 422 0.23 1.25 0.18
99 β Bacteria Aquificae Aquificae (class) Aquificales Aquificaceae Aquifex Aquifex aeolicus VF5 Aaeo_Aa 637000010 224324 637020168 fig|224324.1.peg.800   - No aq_1152   cd04261 cd04913/cd04936 1 0 0   1 Yes No No 637020645     MEK 3 415 0.72 0.93 0.77
99 α Bacteria Chloroflexi Chloroflexi (class) Chloroflexales Chloroflexaceae Roseiflexus Roseiflexus sp. RS-1 ROSE-4a 640427139 357808 640596670 fig|357808.3.peg.2973   - No RoseRS_3079   cd04244 cd04921/cd04922 1 0 0   2 Yes No No     640595579/640596579 absent 2 467 0.42 1.54 0.27
99 α Bacteria Chloroflexi Chloroflexi (class) Chloroflexales Chloroflexaceae Roseiflexus Roseiflexus sp. RS-1 ROSE-4b 640427139 357808 640595637 fig|357808.3.peg.1951   - No RoseRS_2031   cd04243 cd04921 KFGA 0 0   2 Yes No No     640595579/640596579 absent 5 469 1.06 1.54 0.69
99 β Bacteria Deinococcus-Th Deinococci Thermales Thermaceae Thermus Thermus thermophilus HB27 Tthe_Aa 637000322 262724 637498796 fig|262724.1.peg.166   fig|300852.3.peg.1, Thermus thermophilus HB8
 Yes TTC0166   cd04261 cd04913/cd04936 0 1 0 2dt9 1 Yes No No     637498743 MEM 1 422 0.23 1.37 0.17
99 β Bacteria Firmicutes Clostridia Clostridiales unclassified Symbiobacterium Symbiobacterium thermophilum IAM 14863 Sthe-17_Ab 637000306 292459 637538207 fig|292459.1.peg.1624   - No STH1686   cd04261 cd04913/cd04936 1 0 0   2 Yes No No 637539275     VVA 1 421 0.23 1.45 0.16
99 β Bacteria Firmicutes Clostridia Clostridiales Peptococcaceae Carboxydothermus Carboxydothermus hydrogenoformans Z-2901 Chyd_Aa 637000060 246194 637754649 fig|246194.3.peg.2528   - No CHY_1909   cd04261 cd04913/cd04923 0 1 0   2 Yes No No 637754652     LEK 0 406 0 0.85 0
99 β Bacteria Firmicutes Clostridia Clostridiales Syntrophomonadaceae Syntrophomonas Syntrophomonas wolfei wolfei Goettingen Swol_Aa 637000316 335541 638138198 fig|335541.4.peg.1266   - No Swol_1317   cd04261 cd04913/cd04936 1 0 0   1 Yes No No 638138200     MEN 1 406 0.24 0.97 0.25
99 β Bacteria Firmicutes Clostridia Thermoanaerobacter Thermoanaerobacteriace Moorella Moorella thermoacetica ATCC 39073 Mthe-3_Aa 637000167 264732 637829240 fig|264732.9.peg.1298   - No Moth_1304   cd04261 cd04913/cd04936 0 1 0   2 Yes No No 637829243     MER 0 405 0 1.13 0
99 β Bacteria Planctomycetes Planctomycetacia Planctomycetales Planctomycetaceae Rhodopirellula Rhodopirellula baltica SH 1 Rbal_Aa 637000236 243090 637438000 fig|243090.1.peg.4964   - No RB8926   cd04261 cd04913/cd04936/cd04913/cd04936 1 0 0   1 Yes Yes No 637437770     MIV 1 595 0.16 1.54 0.1
99 β Bacteria Proteobacteria Alphaproteobacteria Rickettsiales SAR11 Pelagibacter Candidatus Pelagibacter ubique HTCC1062 Pubi_Aa 637000058 335992 637671386 fig|335992.3.peg.881   - No SAR11_0516   cd04261 cd04913/cd04936 1 0 0   1 Yes No No 637671897     absent 2 403 0.49 0.9 0.54
99 β Bacteria Proteobacteria Deltaproteobacteria Myxococcales Myxococcaceae Myxococcus Myxococcus xanthus DK 1622 Mxan_Ab 637000186 246197 638024825 fig|246197.19.peg.6686   - No MXAN_3466   cd04261 cd04913/cd04936 0 1 0   4 Yes No No       MED 1 425 0.23 1.36 0.17
99 α Bacteria Proteobacteria Deltaproteobacteria Myxococcales Myxococcaceae Myxococcus Myxococcus xanthus DK 1622 Mxan_Ac 637000186 246197 638023646 fig|246197.19.peg.1997   - Yes MXAN_2278 Ask/Hdh cd04243 cd04921/cd04922 1 0 0   4 Yes No No       absent 1 472 0.21 1.36 0.15
99 α Bacteria Proteobacteria Deltaproteobacteria Myxococcales Myxococcaceae Myxococcus Myxococcus xanthus DK 1622 Mxan_Ad 637000186 246197 638022362 fig|246197.19.peg.856   - Yes MXAN_0971 Ask/Hdh cd04243 cd04921/cd04922 1 0 0   4 Yes No No       absent 4 468 0.85 1.36 0.63
99 β Bacteria Proteobacteria Deltaproteobacteria Syntrophobacterale Syntrophobacteraceae Syntrophobacter Syntrophobacter fumaroxidans MPOB Sfum_Aa 639633063 335543 639702939 fig|335543.6.peg.2239   - No Sfum_2173   cd04261 cd04913/cd04936 0 1 0   1 Yes No No 639701985     MEK 0 417 0 1.2 0
99 β Bacteria Proteobacteria Gammaproteobacteria-lower Alteromonadales Pseudoalteromonadaceae Pseudoalteromona Pseudoalteromonas haloplanktis TAC125 Phal_Aa 637000217 326442 637733416 fig|326442.4.peg.508   - No PSHAa0533   cd04261 cd04913/cd04936 1 0 0   4 Yes Yes No       MPG 0 405 0 1.1 0
99 β Bacteria Proteobacteria Gammaproteobacteria-lower Alteromonadales Psychromonadaceae Psychromonas Psychromonas ingrahamii 37 Ping_Aa 639633052 357804 639798495 fig|357804.5.peg.3194   - No Ping_3379   cd04261 cd04913/cd04936 0 1 0   2 Yes Yes No       MES 1 410 0.24 1.14 0.21
99 β Bacteria Proteobacteria Gammaproteobacteria-upper Cardiobacteriales Cardiobacteriaceae Dichelobacter Dichelobacter nodosus VCS1703A Dnod_Aa 640427112 246195 640524868 - - No DNO_0285   cd04261 cd04891/cd04923 0 1 0   1 No No No       VEG 1 413 0.24 1.16 0.21
99 β Bacteria Proteobacteria Gammaproteobacteria-upper Legionellales Coxiellaceae Coxiella Coxiella burnetii RSA 493 Cbur_Aa 637000086 227377 637162720 fig|227377.1.peg.996   - No CBU_1051   cd04261 cd04913/cd04936 1 0 0   1 No No No       absent 2 409 0.48 1.21 0.4
99 β Bacteria Proteobacteria Gammaproteobacteria-upper Methylococcales Methylococcaceae Methylococcus Methylococcus capsulatus Bath Mcap_Aa 637000166 243233 637169609 fig|243233.4.peg.825   - No MCA0390   cd04261 cd04913/cd04936 0 1 0   1 Yes Yes No 637169810     VEK 0 409 0 1.39 0
99 β Bacteria Proteobacteria Gammaproteobacteria-upper Oceanospirillales Halomonadaceae Chromohalobacter Chromohalobacter salexigens DSM 3043 Csal_Aa 637000075 290398 637965794 fig|290398.4.peg.429   - No Csal_0626   cd04261 cd04913/cd04936 1 0 0   1 Yes Yes No 637968216     MEE 0 414 0 1.49 0
99 β Bacteria Proteobacteria Gammaproteobacteria-upper Thiotrichales Piscirickettsiaceae Thiomicrospira Thiomicrospira crunogena XCL-2 Tcru_Aa 637000325 317025 637786326 fig|317025.3.peg.1286   - No Tcr_1589   cd04261 cd04913/cd04936 0 1 0   2 Yes Yes No 637785983     MEK 1 408 0.24 1.24 0.19
99 β Bacteria Proteobacteria Gammaproteobacteria unclassified unclassified Carsonella Candidatus Carsonella ruddii PV Crud_Aa 639633018 387662 639660685 - - No CRP_108   cd04246 cd04913/cd04923 1 0 0   1 Yes No No     639660701 MER 0 412 0 0.46 0
99 β Bacteria Proteobacteria unclassified unclassified unclassified Magnetococcus Magnetococcus sp. MC-1 MAGN-2a 639633036 156889 639721714 fig|156889.7.peg.1026   - No Mmc1_0966   cd04261 cd04913/cd04936 1 0 0   1 Yes Yes No 639722498     MES 1 418 0.23 1.39 0.17
Column "Acronym": Generated by using AroPath web tool (http://aropath.lanl.gov/cgi-bin/Convert_org_to_acronym.cgi)
Column "XXXX Motif": 1 for using XXXX motif at front.

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